RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 ESAMQ96AP7 390 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 RASSF1Q9NS23 344 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 NUAK1O60285 661 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 CILPO75339 1184 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 ARNTP27540 789 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 GGT5P36269 586 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 ARSFP54793 590 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 OR4D2P58180 307 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 SLC6A3Q01959 620 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 NRG1Q02297 640 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 STEAP3Q658P3 488 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 TRAF7Q6Q0C0 670 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 GPR78Q96P69 363 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 C1QTNF1Q9BXJ1 281 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 MID1IP1Q9NPA3 183 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 UBFD1O14562 309 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 ICMTO60725 284 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 PGLSO95336 258 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 ZNF37AP17032 561 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 MTHFRP42898 656 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 HNRNPFP52597 415 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 RAB10P61026 200 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC6-202ENST00000273960 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 CCBE1Q6UXH8 406 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 RBM23Q86U06 439 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 PELI3Q8N2H9 469 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 FAM86B1Q8N7N1 296 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 DTX3Q8N9I9 347 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 TP53I13Q8NBR0 393 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 FAR1Q8WVX9 515 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 PDLIM7Q9NR12 457 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 SNTG2Q9NY99 539 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 PCDHGA11Q9Y5H2 935 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 C16orf96A6NNT2 1141 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 A8MT66 165 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 PIP5K1BO14986 540 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 IFNA8P32881 189 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 CTF1Q16619 201 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 SMN1Q16637 294 aaKnown RBP12.77□□□□□ -0.36
HERC6-202ENST00000273960 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 MCOLN3Q8TDD5 553 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 TEX37Q96LM6 180 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 NAT9Q9BTE0 207 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 GPN2Q9H9Y4 310 aaPredicted RBP12.77□□□□□ -0.36
HERC6-202ENST00000273960 HPS4Q9NQG7 708 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 ADAM28Q9UKQ2 775 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 N6AMT1Q9Y5N5 214 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 SNX8Q9Y5X2 465 aa12.77□□□□□ -0.36
HERC6-202ENST00000273960 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 FAM72CH0Y354 149 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
HERC6-202ENST00000273960 CASP3P42574 277 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 POLD2P49005 469 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 PAGE3Q5JUK9 113 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 FAM72AQ5TYM5 149 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 FAM72DQ6L9T8 149 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 ARHGAP36Q6ZRI8 547 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 FAM72BQ86X60 149 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
HERC6-202ENST00000273960 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 C19orf60Q96EN9 201 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 BDH2Q9BUT1 245 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 ASPSCR1Q9BZE9 553 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 RMND5AQ9H871 391 aa12.77□□□□□ -0.37
HERC6-202ENST00000273960 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
HERC6-202ENST00000273960 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 MITFO75030 526 aaPredicted RBP12.76□□□□□ -0.37
HERC6-202ENST00000273960 SOAT2O75908 522 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 CPNE6O95741 557 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 APOA4P06727 396 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 VDRP11473 427 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 TNFAIP2Q03169 654 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 LAMTOR4Q0VGL1 99 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 KCNAB2Q13303 367 aa12.76□□□□□ -0.37
HERC6-202ENST00000273960 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms