RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF24P17028 368 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC6A2P23975 617 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 EPHX2P34913 555 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 HOXD12P35452 270 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CRADDP78560 199 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 PITPNAQ00169 270 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 EVX2Q03828 476 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 IQCF2Q8IXL9 164 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 CFAP206Q8IYR0 622 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF567Q8N184 647 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC37A3Q8NCC5 494 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 PDCD2LQ9BRP1 358 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ELOVL7A1L3X0 281 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC22A2O15244 555 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 PRODHO43272 600 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ANXA5P08758 320 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ARL4DP49703 201 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 STXBP5Q5T5C0 1151 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 TLR8Q9NR97 1041 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 ARL15Q9NXU5 204 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAM50BQ9Y247 325 aa13.11□□□□□ -0.31
PCDHGA3-201ENST00000253812 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 SCELO95171 688 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MATN1P21941 496 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 S100GP29377 79 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 HYIQ5T013 277 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MED8Q96G25 268 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 SMARCD1Q96GM5 515 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PPM1HQ9ULR3 514 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 GAKO14976 1311 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 AQP12BA6NM10 295 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 RBAK-RBAKDNI3L0D1 243 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PPM1BO75688 479 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MT-ND1P03886 318 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 C2P06681 752 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 COL6A2P12110 1019 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PSMB4P28070 264 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 FMO4P31512 558 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 CDH15P55291 814 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 VMACQ2NL98 169 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 AQP12AQ8IXF9 295 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 GPALPP1Q8IXQ4 340 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 ENDOVQ8N8Q3 282 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM159Q96B96 161 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 CST11Q9H112 138 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 EI24O14681 340 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 SGTAO43765 313 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 LINC00032P0C843 101 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 DGKAP23743 735 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 RAB5BP61020 215 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 TGFBIQ15582 683 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PYHIN1Q6K0P9 492 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF438Q7Z4V0 828 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 PDSS2Q86YH6 399 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 ART5Q96L15 291 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 LIN28AQ9H9Z2 209 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 MTMR10Q9NXD2 777 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
PCDHGA3-201ENST00000253812 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ITGB6P18564 788 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 RPS3P23396 243 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZBTB6Q15916 424 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 RAB12Q6IQ22 244 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC39A3Q9BRY0 314 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 NXF3Q9H4D5 531 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 SIGLEC16A6NMB1 481 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 M0R233 179 aa13.09□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZBTB14O43829 449 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms