RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MLPHQ9BV36 600 aaPredicted RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 NOL11Q9H8H0 719 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 CAPN10Q9HC96 672 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 SH3BP4Q9P0V3 963 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 VTI1BQ9UEU0 232 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF197O14709 1029 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 GPR39O43194 453 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 MYO1DO94832 1006 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 SORBS2O94875 1100 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 GSNP06396 782 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 DLDP09622 509 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 RPL38P63173 70 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ECT2LQ008S8 904 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 RIPK1Q13546 671 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 PDK3Q15120 406 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 MPP4Q96JB8 637 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 SLC25A23Q9BV35 468 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 DPY30Q9C005 99 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ANKRD6Q9Y2G4 727 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 MATN3O15232 486 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 POU1F1P28069 291 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CLCN5P51795 746 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 FRG1Q14331 258 aaKnown RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 TRIM71Q2Q1W2 868 aaKnown RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 ADGRF1Q5T601 910 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CCSAPQ6IQ19 270 aaPredicted RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 FBXW8Q8N3Y1 598 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 STAG3L4Q8TBR4 150 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 SLCO3A1Q9UIG8 710 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 ZDHHC2Q9UIJ5 367 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 POMPQ9Y244 141 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 H3BMM5 538 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CLOCKO15516 846 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 IPO13O94829 963 aaKnown RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 AQP4P55087 323 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 FOLH1Q04609 750 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 LAMB3Q13751 1172 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 LY6G5CQ5SRR4 150 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 Q6ZVU0 165 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 C2orf73Q8N5S3 287 aaPredicted RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CNTD1Q8N815 330 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 VPS33AQ96AX1 596 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 C8orf48Q96LL4 319 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 NSMCE2Q96MF7 247 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 ARMC7Q9H6L4 198 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CFAP99D6REC4 459 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 AZIN1O14977 448 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 FAM58BPP0C7Q3 252 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 NCK1P16333 377 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 LBPP18428 481 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 ACOX1Q15067 660 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 TCEAL1Q15170 157 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CPNE9Q8IYJ1 553 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 TAGAPQ8N103 731 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 DACT3Q96B18 629 aaPredicted RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 MAGED4Q96JG8 741 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 MIPEPQ99797 713 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 SPATA16Q9BXB7 569 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 CLDND1Q9NY35 253 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
CHPF2-201ENST00000035307 EIF3LQ9Y262 564 aaKnown RBP12.01□□□□□ -0.49
CHPF2-201ENST00000035307 TCRBV5S1A1TA0A578 114 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 GRM6O15303 877 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 CLDN11O75508 207 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 XRCC1P18887 633 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 FASP25445 335 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 DSC1Q08554 894 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 CCDC15Q0P6D6 951 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 NAB1Q13506 487 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 DMC1Q14565 340 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 TTLL9Q3SXZ7 439 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 FAM109BQ6ICB4 259 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 GCNT7Q6ZNI0 430 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 SPPL2CQ8IUH8 684 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 SYTL1Q8IYJ3 562 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 HJURPQ8NCD3 748 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 S100A14Q9HCY8 104 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 AP4B1Q9Y6B7 739 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 A0A1B0GVM2 712 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 TCAF2A6NFQ2 919 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 EVPLLA8MZ36 301 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 AURKAO14965 403 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 DLX3O60479 287 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 TMCC1O94876 653 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 HNF4AP41235 474 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 CRY1Q16526 586 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 CACHD1Q5VU97 1274 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 CLVS1Q8IUQ0 354 aaPredicted RBP12□□□□□ -0.49
CHPF2-201ENST00000035307 CLDN19Q8N6F1 224 aa12□□□□□ -0.49
CHPF2-201ENST00000035307 LPGAT1Q92604 370 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms