RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TCEAL9Q9UHQ7 104 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 MKLN1Q9UL63 735 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 POLHQ9Y253 713 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CCDC154A6NI56 674 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 H0Y626 953 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SLC9A3R1O14745 358 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 MDM4O15151 490 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 AXIN1O15169 862 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TBC1D4O60343 1298 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 DGAT1O75907 488 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SEMA3DO95025 777 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CAPN1P07384 714 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 ITGA2P17301 1181 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CFL1P23528 166 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SEPHS1P49903 392 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 STARD3Q14849 445 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SURF1Q15526 300 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CYP51A1Q16850 503 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 FAM171BQ6P995 826 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 PLCZ1Q86YW0 608 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 BLOC1S5Q8TDH9 187 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CHURC1Q8WUH1 139 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SEPT1Q8WYJ6 367 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TFAP2BQ92481 460 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 REXO5Q96IC2 774 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CYP2S1Q96SQ9 504 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SLC30A3Q99726 388 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 KIFC1Q9BW19 673 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 ACAT2Q9BWD1 397 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TRIM39Q9HCM9 518 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 USE1Q9NZ43 259 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 INTS6Q9UL03 887 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 VPS4AQ9UN37 437 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF541Q9H0D2 1346 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 UBXN8O00124 270 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 HMGCRP04035 888 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 IL7P13232 177 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 HCAR3P49019 387 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 DNAJB13P59910 316 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 VBP1P61758 197 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 IRF9Q00978 393 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 Q5BKY6 102 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 TBPL2Q6SJ96 375 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 ZFAND1Q8TCF1 268 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 OMA1Q96E52 524 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 ZFYVE19Q96K21 471 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 CCDC32Q9BV29 185 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 MRPL9Q9BYD2 267 aaKnown RBP11.97□□□□□ -0.49
CAPN3-221ENST00000638141 KAT8Q9H7Z6 458 aaKnown RBP11.97□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF304Q9HCX3 659 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 SEPT10Q9P0V9 454 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 ATPIF1Q9UII2 106 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 A0A0A0MRY4 1105 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 ARNTP27540 789 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 RYKP34925 604 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 GGT5P36269 586 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 CCR10P46092 362 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 GNPDA1P46926 289 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 WNT7BP56706 349 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 UBXN2AP68543 259 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 SPP2Q13103 211 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 UGCGQ16739 394 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 PLEKHG6Q3KR16 790 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 PARP15Q460N3 678 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 LAIR2Q6ISS4 152 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 LETMD1Q6P1Q0 360 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 GATAD2AQ86YP4 633 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 PLD3Q8IV08 490 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 FAM83FQ8NEG4 500 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-221ENST00000638141 LGALS12Q96DT0 336 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 TMEM80Q96HE8 168 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 SPATA13Q96N96 652 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 APOL4Q9BPW4 351 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 C17orf62Q9BQA9 187 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 TRIM54Q9BYV2 358 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 IGSF5Q9NSI5 407 aa11.97□□□□□ -0.49
CAPN3-221ENST00000638141 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 H3BMM5 538 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 TK2O00142 265 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 FXYD1O00168 92 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 UPK1AO00322 258 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 PRKD3O94806 890 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ERP29P30040 261 aaKnown RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 GMPRP36959 345 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ST13P50502 369 aaKnown RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 CD47Q08722 323 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 IKZF1Q13422 519 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 COLEC12Q5KU26 742 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms