RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PPM1JQ5JR12 505 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 KCTD16Q68DU8 428 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 LINC00523Q86TU6 105 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 EID2Q8N6I1 236 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 BRSK1Q8TDC3 778 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 OR1E3Q8WZA6 343 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 COX14Q96I36 57 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 HIC2Q96JB3 615 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 ZSCAN5AQ9BUG6 496 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 LRRC61Q9BV99 259 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 SPATA16Q9BXB7 569 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 FRMD8Q9BZ67 464 aaPredicted RBP18.18■□□□□ 0.5
LITAF-220ENST00000620789 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 SPASTQ9UBP0 616 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 PKP3Q9Y446 797 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 DGKBQ9Y6T7 804 aa18.18■□□□□ 0.5
LITAF-220ENST00000620789 CNOT1A5YKK6 2376 aaKnown RBP18.18■□□□□ 0.5
LITAF-220ENST00000620789 CACNA1AO00555 2505 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 COL5A1P20908 1838 aaPredicted RBP18.17■□□□□ 0.5
LITAF-220ENST00000620789 NEMP2A6NFY4 417 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 C2orf81A6NN90 581 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 INPP4BO15327 924 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 BUD23O43709 281 aaKnown RBP18.17■□□□□ 0.5
LITAF-220ENST00000620789 PPFIA2O75334 1257 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 SUN1O94901 812 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 CEACAM5P06731 702 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 KCNA4P22459 653 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 LMAN1P49257 510 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 PRRT3Q5FWE3 981 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 ZDHHC20Q5W0Z9 365 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 PDPK2PQ6A1A2 396 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 CCDC137Q6PK04 289 aaKnown RBP18.17■□□□□ 0.5
LITAF-220ENST00000620789 RD3Q7Z3Z2 195 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 CREG2Q8IUH2 290 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 TRAM1L1Q8N609 369 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 LMX1AQ8TE12 382 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 CDC6Q99741 560 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 MRPL40Q9NQ50 206 aaKnown RBP18.17■□□□□ 0.5
LITAF-220ENST00000620789 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■□□□□ 8.7
LITAF-220ENST00000620789 SLC17A4Q9Y2C5 497 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 ARL5AQ9Y689 179 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 CSNK1G3Q9Y6M4 447 aa18.17■□□□□ 0.5
LITAF-220ENST00000620789 TDRD6O60522 2096 aaKnown RBP18.17■□□□□ 0.5
LITAF-220ENST00000620789 PRSS38A1L453 326 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 SCAMP1O15126 338 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 STX7O15400 261 aaKnown RBP18.16■□□□□ 0.5
LITAF-220ENST00000620789 CRTAMO95727 393 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 TNFP01375 233 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 APRTP07741 180 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 GIMD1P0DJR0 217 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 LPOP22079 712 aaPredicted RBP18.16■□□□□ 0.5
LITAF-220ENST00000620789 SPAM1P38567 509 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 FNTAP49354 379 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
LITAF-220ENST00000620789 PDE1BQ01064 536 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
LITAF-220ENST00000620789 TRIM74Q86UV6 250 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 OR4C6Q8NH72 309 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 CAPZA3Q96KX2 299 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 CYP4F12Q9HCS2 524 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 NLGN3Q9NZ94 848 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 FTSJ1Q9UET6 329 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 MOSPD1Q9UJG1 213 aa18.16■□□□□ 0.5
LITAF-220ENST00000620789 CNOT6Q9ULM6 557 aaKnown RBP18.16■□□□□ 0.5
LITAF-220ENST00000620789 BPTFQ12830 3046 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 FFAR2O15552 330 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 KRT14P02533 472 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 ALPPL2P10696 532 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 CTSEP14091 401 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 TPH1P17752 444 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 BASP1P80723 227 aaKnown RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 CDH17Q12864 832 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 C1orf61Q13536 156 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 ELOCQ15369 112 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 TRIP13Q15645 432 aaPredicted RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 DOK6Q6PKX4 331 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 PPP1R21Q6ZMI0 780 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 GLRX5Q86SX6 157 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 FSTL5Q8N475 847 aaPredicted RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 OR52K1Q8NGK4 314 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 DTX3LQ8TDB6 740 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 GRK7Q8WTQ7 553 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 CLPBQ9H078 707 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 CARS2Q9HA77 564 aaKnown RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 IL26Q9NPH9 171 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 EIF2B3Q9NR50 452 aaKnown RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 PIH1D1Q9NWS0 290 aaKnown RBP18.15■□□□□ 0.5
LITAF-220ENST00000620789 TMEM98Q9Y2Y6 226 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 KCTD3Q9Y597 815 aa18.15■□□□□ 0.5
LITAF-220ENST00000620789 GLYATL1P3A0A0U1RQE8 302 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 SPAARA0A1B0GVQ0 90 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 LMO7DNF2Z398 122 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 TRIM38O00635 465 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 LDB2O43679 373 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 SIGLEC6O43699 453 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 FUCA1P04066 466 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 IVLP07476 585 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 CASQ1P31415 396 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 POLD2P49005 469 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 SIM1P81133 766 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms