RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ATP5OP48047 213 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 WNT3AP56704 352 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 GSDMDP57764 484 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 CYP4F3Q08477 520 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 TMC3Q7Z5M5 1100 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 TRIM74Q86UV6 250 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 PROSER1Q86XN7 944 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 GPR156Q8NFN8 814 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 MAPK15Q8TD08 544 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 CCHCR1Q8TD31 782 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 FAM118BQ9BPY3 351 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 FAM83DQ9H4H8 585 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 ZFYVE1Q9HBF4 777 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 TRNAU1APQ9NX07 287 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 PKD2L2Q9NZM6 624 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 TRHDEQ9UKU6 1024 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 SHOC2Q9UQ13 582 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 CAPN6Q9Y6Q1 641 aa18.39■□□□□ 0.53
SHKBP1-202ENST00000593764 SRRM3A6NNA2 597 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 FADS2P1A8MWK0 482 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 F5H423 210 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 NOBOXO60393 691 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 KRT37O76014 449 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 EPOP01588 193 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 PYGLP06737 847 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 GNPDA1P46926 289 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 CCDC181Q5TID7 509 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 DOK6Q6PKX4 331 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 RNF10Q8N5U6 811 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 FAM46DQ8NEK8 389 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 NAT6Q93015 286 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 HES6Q96HZ4 224 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 MRGPRX2Q96LB1 330 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 GORASP1Q9BQQ3 440 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 ABCG4Q9H172 646 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 SUDS3Q9H7L9 328 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 RABGEF1Q9UJ41 708 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 ZNF711Q9Y462 761 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 SPO11Q9Y5K1 396 aa18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 OAS3Q9Y6K5 1087 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-202ENST00000593764 DSPP15924 2871 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 MIF4GDA9UHW6 222 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 AURKAO14965 403 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 INPP4BO15327 924 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 TJP3O95049 919 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 RBP3P10745 1247 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 ADCY8P40145 1251 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 CETN2P41208 172 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 RTP5Q14D33 572 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 UBL4BQ8N7F7 174 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 GPR26Q8NDV2 337 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 CCDC3Q9BQI4 270 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 NRSN2Q9GZP1 204 aa18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 SPATS2LQ9NUQ6 558 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 PCYT1BQ9Y5K3 369 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 COL27A1Q8IZC6 1860 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 URB1O60287 2271 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-202ENST00000593764 AK4P27144 223 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 CHRNA4P43681 627 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 CTBSQ01459 385 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 KLF1Q13351 362 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 PYCR3Q53H96 274 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 SIRPB2Q5JXA9 342 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 CCDC70Q6NSX1 233 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 GPR63Q9BZJ6 419 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 DPEP2Q9H4A9 486 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 PLEKHM1Q9Y4G2 1056 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 PCDHB1Q9Y5F3 818 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 ZFHX4Q86UP3 3567 aa18.36■□□□□ 0.53
SHKBP1-202ENST00000593764 PKD1L2Q7Z442 2459 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 NTN3O00634 580 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ARHGAP6O43182 974 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 DNAJC6O75061 913 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 FGF1P05230 155 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 BPIP17213 487 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 DCDC1P59894 354 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ILF3Q12906 894 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 MPP3Q13368 585 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 HLTFQ14527 1009 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 SLC1A5Q15758 541 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ANKRD20A2Q5SQ80 823 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ANKRD20A1Q5TYW2 823 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 ANKRD20A3Q5VUR7 823 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 DARS2Q6PI48 645 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 MARK2Q7KZI7 788 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 C17orf82Q86X59 251 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 CCDC74AQ96AQ1 378 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 DEPDC7Q96QD5 511 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 SRPK1Q96SB4 655 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 GSDMCQ9BYG8 508 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 CDH19Q9H159 772 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 GBA3Q9H227 469 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 TAAR2Q9P1P5 351 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 NFKBIL1Q9UBC1 381 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 RSPH14Q9UHP6 348 aa18.35■□□□□ 0.53
SHKBP1-202ENST00000593764 GUCA1BQ9UMX6 200 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms