RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TKTP29401 623 aaKnown RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 C21orf33P30042 268 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 ELF1P32519 619 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 AMTP48728 403 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 GLUD2P49448 558 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 CLDN2P57739 230 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 BPIFB3P59826 476 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 NANOS2P60321 138 aaKnown RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 EGR4Q05215 589 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TRAF2Q12933 501 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 PTPN14Q15678 1187 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 HIST2H2ACQ16777 129 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 SLC9B1Q4ZJI4 515 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 ESCO2Q56NI9 601 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 HECTD3Q5T447 861 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 LRRC8EQ6NSJ5 796 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TMCO3Q6UWJ1 677 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 ARMC8Q8IUR7 673 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 SFTPA2Q8IWL1 248 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TRIB2Q92519 343 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 ZUFSPQ96AP4 578 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 KLHL29Q96CT2 875 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 MARK4Q96L34 752 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 SLC25A18Q9H1K4 315 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 PLEKHA5Q9HAU0 1116 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 CLK4Q9HAZ1 481 aaKnown RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 PDRG1Q9NUG6 133 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 OR6C3Q9NZP0 311 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 HSPB7Q9UBY9 170 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 PA2G4Q9UQ80 394 aaKnown RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 CAMK2AQ9UQM7 478 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 FAM96BQ9Y3D0 163 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 PRAG1Q86YV5 1406 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 XRN1Q8IZH2 1706 aaKnown RBP5.02□□□□□ -1.61
SMAD4-216ENST00000593223 METP08581 1390 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 GPRASP1Q5JY77 1395 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TULP4Q9NRJ4 1543 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 SOX30O94993 753 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 CCDC159P0C7I6 412 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 KRT9P35527 623 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 CXCR3P49682 368 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ADORA2A-AS1P86434 159 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 TMED1Q13445 227 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ZKSCAN8Q15776 578 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 HLFQ16534 295 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 SOWAHAQ2M3V2 549 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ACAD10Q6JQN1 1059 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 DSTYKQ6XUX3 929 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 CATSPER4Q7RTX7 472 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 SDCCAG8Q86SQ7 713 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 TDRPQ86YL5 185 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 CCAR2Q8N163 923 aaKnown RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ZCCHC9Q8N567 271 aaKnown RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 TSPYL6Q8N831 410 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 MSANTD4Q8NCY6 345 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 OR8H1Q8NGG4 311 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ELP5Q8TE02 316 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 N4BP2L2Q92802 583 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 TREX2Q9BQ50 279 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 MXRA8Q9BRK3 442 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 JMJD4Q9H9V9 463 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 PREBQ9HCU5 417 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 ZCCHC17Q9NP64 241 aaKnown RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 SARDHQ9UL12 918 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 RABL2BQ9UNT1 228 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 RGPD3A6NKT7 1758 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-216ENST00000593223 RGPD4Q7Z3J3 1758 aa5.01□□□□□ -1.61
SMAD4-216ENST00000593223 FYCO1Q9BQS8 1478 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 MYO5BQ9ULV0 1848 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 TECPR2O15040 1411 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 SYNDIG1LA6NDD5 238 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 BCAT2O15382 392 aaPredicted RBP5□□□□□ -1.61
SMAD4-216ENST00000593223 KCNAB3O43448 404 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 DKC1O60832 514 aaKnown RBP eCLIP5□□□□□ -1.61
SMAD4-216ENST00000593223 KCNJ13O60928 360 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 TIPRLO75663 272 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 F9P00740 461 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 HEXAP06865 529 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 CCKARP32238 428 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 ARL1P40616 181 aaPredicted RBP5□□□□□ -1.61
SMAD4-216ENST00000593223 TPD52P55327 224 aaPredicted RBP5□□□□□ -1.61
SMAD4-216ENST00000593223 LTBQ06643 244 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 SHBQ15464 509 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 KLHL24Q6TFL4 600 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 ABRAXAS1Q6UWZ7 409 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 NEK10Q6ZWH5 1172 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 NFKBIDQ8NI38 313 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 ARRDC2Q8TBH0 407 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 PHF21BQ96EK2 531 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 SAAL1Q96ER3 474 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 ZNF570Q96NI8 536 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 H2AFJQ9BTM1 129 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 BPIFA1Q9NP55 256 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 NFKBIL1Q9UBC1 381 aaPredicted RBP5□□□□□ -1.61
SMAD4-216ENST00000593223 SMC3Q9UQE7 1217 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 CCNB3Q8WWL7 1395 aa5□□□□□ -1.61
SMAD4-216ENST00000593223 TRIP12Q14669 1992 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms