RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CCDC66A2RUB6 948 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 NEMP2A6NFY4 417 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 TMEM229AB2RXF0 380 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 GCATO75600 419 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 RFPL3O75679 317 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 SOD1P00441 154 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 C1SP09871 688 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 ZNF30P17039 623 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CA4P22748 312 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 TEAD1P28347 426 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CD68P34810 354 aaPredicted RBP11.19□□□□□ -0.62
SMAD4-211ENST00000590499 ETV3P41162 512 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 HK3P52790 923 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 STC1P52823 247 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 GSDMDP57764 484 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 PPARDQ03181 441 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 ILKQ13418 452 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 TEX44Q53QW1 395 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 LRRC66Q68CR7 880 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 PNCKQ6P2M8 343 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 DHRS13Q6UX07 377 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CCNI2Q6ZMN8 369 aaPredicted RBP11.19□□□□□ -0.62
SMAD4-211ENST00000590499 RFLNAQ6ZTI6 216 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 Q6ZVL8 140 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CCDC50Q8IVM0 306 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 LPCAT1Q8NF37 534 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
SMAD4-211ENST00000590499 P3H4Q92791 437 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 PDXPQ96GD0 296 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 APOLD1Q96LR9 279 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 TEKT5Q96M29 485 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 WDR92Q96MX6 357 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 AGAP3Q96P47 875 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMAD4-211ENST00000590499 DUSP23Q9BVJ7 150 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CLPBQ9H078 707 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 SLC25A51Q9H1U9 297 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 FGF22Q9HCT0 170 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 KCTD5Q9NXV2 234 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 SPASTQ9UBP0 616 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 PCDHGA11Q9Y5H2 935 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 DGKBQ9Y6T7 804 aa11.19□□□□□ -0.62
SMAD4-211ENST00000590499 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ZFC3H1O60293 1989 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 MACROD2A1Z1Q3 448 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 TMEM202A6NGA9 273 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 HACD1B0YJ81 288 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 C1QTNF9BB2RNN3 333 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 LMO7DNF2Z398 122 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 APOC4-APOC2K7ER74 178 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 TPP1O14773 563 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 RASGRP1O95267 797 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 APOC2P02655 101 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 C1QTNF9P0C862 333 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ALPPL2P10696 532 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 CDK4P11802 303 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 CKMT1AP12532 417 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 TSHRP16473 764 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 HTR1BP28222 390 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 EPHB1P54762 984 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 RWDD2BP57060 319 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 SRP54P61011 504 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 DPTQ07507 201 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 KIF5AQ12840 1032 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ARHGEF7Q14155 803 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 NOMO1Q15155 1222 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 PRRT3Q5FWE3 981 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 DENND2CQ68D51 928 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ZCCHC8Q6NZY4 707 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ENPP7Q6UWV6 458 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 ZNF765Q7L2R6 523 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 NDUFAF2Q8N183 169 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 OR1E3Q8WZA6 343 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 TSACCQ96A04 125 aaPredicted RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 HAUS1Q96CS2 278 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 RBM15Q96T37 977 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 BOCQ9BWV1 1114 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 LGR4Q9BXB1 951 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 TEX101Q9BY14 249 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 OSBPL8Q9BZF1 889 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 WDR26Q9H7D7 661 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 GLOD4Q9HC38 313 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 SEPT10Q9P0V9 454 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
SMAD4-211ENST00000590499 DSPP15924 2871 aaKnown RBP11.18□□□□□ -0.62
SMAD4-211ENST00000590499 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 GOLGA6L6A8MZA4 724 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 ANKRD66B4E2M5 251 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 CACNB4O00305 520 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 TNFRSF10CO14798 259 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 DDX3YO15523 660 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms