RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GPR180Q86V85 440 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 RP9Q8TA86 221 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 IGSF8Q969P0 613 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ASIC4Q96FT7 647 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SPATA17Q96L03 361 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 COG8Q96MW5 612 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 OSBPL11Q9BXB4 747 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MRPL46Q9H2W6 279 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 RHOJQ9H4E5 214 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TLR9Q9NR96 1032 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 VWA7Q9Y334 891 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PCDHB5Q9Y5E4 795 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SDHDO14521 159 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 DCLK1O15075 740 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SNAP91O60641 907 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 AXLP30530 894 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ALDH7A1P49419 539 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 FCGRTP55899 365 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 RELAQ04206 551 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZBTB6Q15916 424 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 LIPMQ5VYY2 423 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PTRHD1Q6GMV3 140 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PIWIL3Q7Z3Z3 882 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CUZD1Q86UP6 607 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CLDN19Q8N6F1 224 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 GABPB2Q8TAK5 448 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 DDI1Q8WTU0 396 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ANKRD49Q8WVL7 239 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 VPS50Q96JG6 964 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 C3orf30Q96M34 536 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 OSBPL6Q9BZF3 934 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CACNA2D2Q9NY47 1150 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MID2Q9UJV3 735 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TRIP12Q14669 1992 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 ARID1BQ8NFD5 2236 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MTSS1O43312 755 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 SLC2A3P11169 496 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MBL2P11226 248 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 HGFP14210 728 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MATN1P21941 496 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 BMXP51813 675 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 BTG3Q14201 252 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 TRIM25Q14258 630 aaKnown RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 HECTD2Q5U5R9 776 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 CST9Q5W186 159 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 GLT6D1Q7Z4J2 308 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 SETD3Q86TU7 594 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 ULK4Q96C45 1275 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 NEURL2Q9BR09 285 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 GPR62Q9BZJ7 368 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 STN1Q9H668 368 aaKnown RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 DGKBQ9Y6T7 804 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RLFQ13129 1914 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MYLKQ15746 1914 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 FUOMA2VDF0 154 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 TOR1BO14657 336 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 SERPINB7O75635 380 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MPOP05164 745 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RHOCP08134 193 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 CNTFP26441 200 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 LRPAP1P30533 357 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 GSTM4Q03013 218 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RAB39AQ14964 217 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 TSNQ15631 228 aaKnown RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 AP5B1Q2VPB7 878 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RGMBQ6NW40 437 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 C4orf22Q6V702 233 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 CYHR1Q6ZMK1 362 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 PRR23BQ6ZRT6 265 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 NCCRP1Q6ZVX7 275 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 MICAL3Q7RTP6 2002 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 RNF180Q86T96 592 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 TBC1D15Q8TC07 691 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 OLFM1Q99784 485 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 DRC3Q9H069 523 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 TNKS2Q9H2K2 1166 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 OSER1Q9NX31 292 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 SUN2Q9UH99 717 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 PRPF19Q9UMS4 504 aaKnown RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 PKP3Q9Y446 797 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 ST14Q9Y5Y6 855 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-215ENST00000575112 GSTA4O15217 222 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 IRAK2O43187 625 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 KPNA6O60684 536 aa8.5□□□□□ -1.05
RPAIN-215ENST00000575112 GOT2P00505 430 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms