RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 INHBCP55103 352 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 ACTR1AP61163 376 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 B3GNT8Q7Z7M8 397 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 GALNT13Q8IUC8 556 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 SPATA22Q8NHS9 363 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 WDR36Q8NI36 951 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 P3H4Q92791 437 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 IMP4Q96G21 291 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 OR2M4Q96R27 311 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 LYSMD1Q96S90 227 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 STRADBQ9C0K7 418 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 SLC25A51Q9H1U9 297 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 FAM83DQ9H4H8 585 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 APPL1Q9UKG1 709 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PLEKHM1Q9Y4G2 1056 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
NPLOC4-213ENST00000573519 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 A0A0A6YYK5 440 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 F5H423 210 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 TMX2-CTNND1H3BSU7 103 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 NUDT21O43809 227 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PMPCBO75439 489 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 DXOO77932 396 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 TNFSF15O95150 251 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ECEL1O95672 775 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 MT-CYBP00156 380 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ATP1A1P05023 1023 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PNLIPP16233 465 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PTPN3P26045 913 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ALDH4A1P30038 563 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 NR2C2P49116 596 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 SPINT3P49223 89 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PPM1FP49593 454 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ERVPABLB-1P60509 514 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 CDK18Q07002 472 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PEX6Q13608 980 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 AMZ1Q400G9 498 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 TFDP3Q5H9I0 405 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 RCOR2Q8IZ40 523 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 KCNE4Q8WWG9 221 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 KRT35Q92764 455 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 TMEM74Q96NL1 305 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 DESI2Q9BSY9 194 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ZFYVE1Q9HBF4 777 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 GLOD4Q9HC38 313 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNHIT2Q9UHR6 403 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 PRKAB1Q9Y478 270 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 ST14Q9Y5Y6 855 aa12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 GOLGA4Q13439 2230 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-213ENST00000573519 CHD6Q8TD26 2715 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 COL27A1Q8IZC6 1860 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 FADS2P1A8MWK0 482 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 TNNT3P45378 269 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 ADCY2Q08462 1091 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 PYCR3Q53H96 274 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 CCDC181Q5TID7 509 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 BROXQ5VW32 411 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 RAB11FIP2Q7L804 512 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 CHST15Q7LFX5 561 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 JAMLQ86YT9 394 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 SPACA3Q8IXA5 215 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 RAVER1Q8IY67 606 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 LIN37Q96GY3 246 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 COX14Q96I36 57 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 RBM41Q96IZ5 413 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 TEKT5Q96M29 485 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 FCRL3Q96P31 734 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms