RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	LYSMD3	Q7Z3D4	306 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	ZC3H18	Q86VM9	953 aa	Known RBP	13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	NRROS	Q86YC3	692 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	LRRC57	Q8N9N7	239 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	SPATA22	Q8NHS9	363 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	CCDC74A	Q96AQ1	378 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	WDR24	Q96S15	920 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	FAM83D	Q9H4H8	585 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	ZFYVE1	Q9HBF4	777 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	RAD18	Q9NS91	495 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	VPS18	Q9P253	973 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	FAM153A	Q9UHL3	310 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	APPL1	Q9UKG1	709 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784		A0A087WV48	116 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784		B4DGG1	531 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	NUDT21	O43809	227 aa	Known RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	DXO	O77932	396 aa	Known RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	ACTN2	P35609	894 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	ADCY8	P40145	1251 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	LSS	P48449	732 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	POLD2	P49005	469 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	DCDC1	P59894	354 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	CTBS	Q01459	385 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	NOMO1	Q15155	1222 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	PCSK7	Q16549	785 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	PYCR3	Q53H96	274 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	CCDC70	Q6NSX1	233 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	DOK6	Q6PKX4	331 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	KIAA1328	Q86T90	577 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	C17orf82	Q86X59	251 aa	Predicted RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	LSMEM2	Q8N112	164 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	ZNF567	Q8N184	647 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	SNIP1	Q8TAD8	396 aa	Known RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	PTCD2	Q8WV60	388 aa	Known RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	HTR3C	Q8WXA8	447 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	HAUS1	Q96CS2	278 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	EID2B	Q96D98	161 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	OR2M4	Q96R27	311 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	FCRL5	Q96RD9	977 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	HEMGN	Q9BXL5	484 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	DPEP2	Q9H4A9	486 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	POLR1B	Q9H9Y6	1135 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	TAAR2	Q9P1P5	351 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	RABGEF1	Q9UJ41	708 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	CNOT6	Q9ULM6	557 aa	Known RBP	13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	TMEM98	Q9Y2Y6	226 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	ENTPD2	Q9Y5L3	495 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	ST14	Q9Y5Y6	855 aa		13.76	□□□□□ -0.21
PKD1-231	ENST00000566784	PTPRQ	Q9UMZ3	2332 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	LOC285095	A0A1B0GVY8	99 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	GRID2IP	A4D2P6	1211 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	PMPCB	O75439	489 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	EPO	P01588	193 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	FGF1	P05230	155 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	NFKB1	P19838	968 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	AK4	P27144	223 aa	Predicted RBP	13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	PDX1	P52945	283 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	RWDD2B	P57060	319 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	GABRE	P78334	506 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	KIF5A	Q12840	1032 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	LRP8	Q14114	963 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	TBC1D25	Q3MII6	688 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	CCDC181	Q5TID7	509 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	PDPK2P	Q6A1A2	396 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	IGF2-AS	Q6U949	168 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	KDELC1	Q6UW63	502 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	KDELC2	Q7Z4H8	507 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	TMC3	Q7Z5M5	1100 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	TRIM74	Q86UV6	250 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	ZDHHC1	Q8WTX9	485 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	FGF11	Q92914	225 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	GFM1	Q96RP9	751 aa	Known RBP	13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	ZSCAN5A	Q9BUG6	496 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	OSBPL8	Q9BZF1	889 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	RMI1	Q9H9A7	625 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	TRHDE	Q9UKU6	1024 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	ZNF711	Q9Y462	761 aa		13.75	□□□□□ -0.21
PKD1-231	ENST00000566784	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.74	□□□□□ -0.21
PKD1-231	ENST00000566784		A0A1W2PQM1	296 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	FADS2P1	A8MWK0	482 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	GOLGA6L6	A8MZA4	724 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784		D6RAR5	112 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	TMX2-CTNND1	H3BSU7	103 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	CASC3	O15234	703 aa	Known RBP	13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	INPP4B	O15327	924 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	TLX3	O43711	291 aa	Predicted RBP	13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	DNAJC6	O75061	913 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	MPO	P05164	745 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	RPLP0	P05388	317 aa	Known RBP	13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	PIRT	P0C851	137 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	CETN2	P41208	172 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	WNT3A	P56704	352 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	CCL7	P80098	99 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	MPP3	Q13368	585 aa		13.74	□□□□□ -0.21
PKD1-231	ENST00000566784	SLC30A9	Q6PML9	568 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms