RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 MYO5BQ9ULV0 1848 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 NPHP1O15259 732 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 KLK8O60259 260 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 NBNO60934 754 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 ETFAP13804 333 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 MARK3P27448 753 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 ANP32AP39687 249 aaKnown RBP4.21□□□□□ -1.74
CHD9-212ENST00000564641 TMPOP42166 694 aaKnown RBP4.21□□□□□ -1.74
CHD9-212ENST00000564641 CLCNKAP51800 687 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 ARL4CP56559 192 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 PMP22Q01453 160 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 CTF1Q16619 201 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 ALFQ53S48 1182 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 KCNT1Q5JUK3 1230 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 TMED8Q6PL24 325 aaPredicted RBP4.21□□□□□ -1.74
CHD9-212ENST00000564641 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.21□□□□□ -1.74
CHD9-212ENST00000564641 HERC6Q8IVU3 1022 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 BEST2Q8NFU1 509 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 TNIP2Q8NFZ5 429 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 SCLT1Q96NL6 688 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 TWNKQ96RR1 684 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 SIN3AQ96ST3 1273 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 LRRC1Q9BTT6 524 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 MROH8Q9H579 483 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 PLEKHA5Q9HAU0 1116 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 CNGB3Q9NQW8 809 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 IL1RAPL1Q9NZN1 696 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 GTF2A1LQ9UNN4 478 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 MMP24Q9Y5R2 645 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 DGKBQ9Y6T7 804 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 SETBP1Q9Y6X0 1596 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 COL16A1Q07092 1604 aaPredicted RBP4.21□□□□□ -1.74
CHD9-212ENST00000564641 HFM1A2PYH4 1435 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 SETD5Q9C0A6 1442 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 ADGRL3Q9HAR2 1447 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 NPHP3Q7Z494 1330 aa4.21□□□□□ -1.74
CHD9-212ENST00000564641 E9PCH4 1651 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 CAPN9O14815 690 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 KLK10O43240 276 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 PRSS1P07477 247 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 MMP2P08253 660 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 CDH1P12830 882 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 HSD3B1P14060 373 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 TIMP3P35625 211 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 FMO5P49326 533 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 CLCN3P51790 818 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 TERF1P54274 439 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 ATP12AP54707 1039 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 FOXD4Q12950 439 aaPredicted RBP4.2□□□□□ -1.74
CHD9-212ENST00000564641 TAF11Q15544 211 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 KIF26BQ2KJY2 2108 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 TUBB8Q3ZCM7 444 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 CPLX2Q6PUV4 134 aaKnown RBP4.2□□□□□ -1.74
CHD9-212ENST00000564641 BRINP3Q76B58 766 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 ADGRG6Q86SQ4 1221 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 KMT5CQ86Y97 462 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.2□□□□□ -1.74
CHD9-212ENST00000564641 C11orf65Q8NCR3 313 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 SH3GL2Q99962 352 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 AMDHD2Q9Y303 409 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 ASXL1Q8IXJ9 1541 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 PTCH1Q13635 1447 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 ADAMTS13Q76LX8 1427 aa4.2□□□□□ -1.74
CHD9-212ENST00000564641 ANKRD30BQ9BXX2 1392 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 ZG16O60844 167 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 GUCY1B2O75343 617 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 LDLRP01130 860 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 APOHP02749 345 aaPredicted RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 AGAP20933 346 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 PPM1FP49593 454 aaPredicted RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 CLDN2P57739 230 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 EEF1A1P68104 462 aaKnown RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 CHRNDQ07001 517 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 VEPH1Q14D04 833 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 TCTN1Q2MV58 587 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 FBXO47Q5MNV8 452 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 CCNYL2Q5T2Q4 361 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 EEF1A1P5Q5VTE0 462 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 TAOK1Q7L7X3 1001 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 LINGO2Q7L985 606 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 DSG4Q86SJ6 1040 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 TADA2BQ86TJ2 420 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 SLC9B2Q86UD5 537 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 ZNF354CQ86Y25 554 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 TMTC1Q8IUR5 882 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 CHERPQ8IWX8 916 aaKnown RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 RNF113BQ8IZP6 322 aaKnown RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 CTCFLQ8NI51 663 aaPredicted RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 CCT6BQ92526 530 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 STAMQ92783 540 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 RILPL2Q969X0 211 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 COG8Q96MW5 612 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 HAUS8Q9BT25 410 aa4.19□□□□□ -1.74
CHD9-212ENST00000564641 RBM4Q9BWF3 364 aaKnown RBP4.19□□□□□ -1.74
CHD9-212ENST00000564641 BARHL1Q9BZE3 327 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms