RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 FOXR1Q6PIV2 292 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 WDR48Q8TAF3 677 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 KIAA1524Q8TCG1 905 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 ZDHHC1Q8WTX9 485 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 P3H4Q92791 437 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 FGF11Q92914 225 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 TADA1Q96BN2 335 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 EID2BQ96D98 161 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 RBM41Q96IZ5 413 aaKnown RBP25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 OR2M4Q96R27 311 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 HEMGNQ9BXL5 484 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 FOXP3Q9BZS1 431 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 PKD2L2Q9NZM6 624 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 SHOC2Q9UQ13 582 aa25.14■■□□□ 1.62
AC009041.3-201ENST00000564390 NBEAQ8NFP9 2946 aa25.14■■□□□ 1.61
AC009041.3-201ENST00000564390 FADS2P1A8MWK0 482 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 D6RAR5 112 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 PMPCBO75439 489 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 IPO7O95373 1038 aaKnown RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 ATP1A1P05023 1023 aaKnown RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 GLB1P16278 677 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 ABCG1P45844 678 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 LSSP48449 732 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 CDK18Q07002 472 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 WASHC5Q12768 1159 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 HENMT1Q5T8I9 393 aaKnown RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 ALS2CLQ60I27 953 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 BZW1Q7L1Q6 419 aaKnown RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 RCOR2Q8IZ40 523 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 OR6C4Q8NGE1 309 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 EXD1Q8NHP7 514 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 CCHCR1Q8TD31 782 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 PATE1Q8WXA2 126 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 COX14Q96I36 57 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 TEKT5Q96M29 485 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 CDH19Q9H159 772 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 LRIT1Q9P2V4 623 aa25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 PCYT1BQ9Y5K3 369 aaPredicted RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 OAS3Q9Y6K5 1087 aaKnown RBP25.13■■□□□ 1.61
AC009041.3-201ENST00000564390 ZFYVE26Q68DK2 2539 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 ASMTLO95671 621 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 FGF1P05230 155 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 PYGLP06737 847 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 NFKB1P19838 968 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 CD68P34810 354 aaPredicted RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 NAP1L1P55209 391 aaKnown RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 CCDC173Q0VFZ6 552 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 SPRED1Q7Z699 444 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 PDZD3Q86UT5 571 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 NLRP8Q86W28 1048 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 SCARF2Q96GP6 870 aaPredicted RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 NAF1Q96HR8 494 aaKnown RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 QKIQ96PU8 341 aaKnown RBP eCLIP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 HERPUD2Q9BSE4 406 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 LACRTQ9GZZ8 138 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 LRRN3Q9H3W5 708 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 FAM83DQ9H4H8 585 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 EPB41L5Q9HCM4 733 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 ASCL3Q9NQ33 180 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 ATXN7L1Q9ULK2 861 aaPredicted RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 CNOT6Q9ULM6 557 aaKnown RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 ZNF711Q9Y462 761 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 PRKAB1Q9Y478 270 aa25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 URB1O60287 2271 aaKnown RBP25.12■■□□□ 1.61
AC009041.3-201ENST00000564390 ACTR1BP42025 376 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 ACTR1AP61163 376 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 NOMO1Q15155 1222 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 PYCR3Q53H96 274 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 LRRC69Q6ZNQ3 347 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 GALNT13Q8IUC8 556 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 C10orf88Q9H8K7 445 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 ZFYVE1Q9HBF4 777 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 KLHL8Q9P2G9 620 aaPredicted RBP25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 APPL1Q9UKG1 709 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 FAM208BQ5VWN6 2430 aa25.11■■□□□ 1.61
AC009041.3-201ENST00000564390 RRP8O43159 456 aaKnown RBP25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 DXOO77932 396 aaKnown RBP25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 ECEL1O95672 775 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 CTNNA1P35221 906 aaKnown RBP25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 SLC14A2Q15849 920 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 PPP2R5EQ16537 467 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 BBS12Q6ZW61 710 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 GRAMD1AQ96CP6 724 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 ZNF578Q96N58 590 aaPredicted RBP25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 ARFGAP3Q9NP61 516 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 SPO11Q9Y5K1 396 aa25.1■■□□□ 1.61
AC009041.3-201ENST00000564390 ARHGEF17Q96PE2 2063 aaPredicted RBP25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 MACROD2A1Z1Q3 448 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 AGRPO00253 132 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 NUDT21O43809 227 aaKnown RBP25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 NDST3O95803 873 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 RAVER1Q8IY67 606 aaKnown RBP25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 LSMEM2Q8N112 164 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 ZNF567Q8N184 647 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 GPR26Q8NDV2 337 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 PRR11Q96HE9 360 aaPredicted RBP25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 BAG1Q99933 345 aaPredicted RBP25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 SPATA16Q9BXB7 569 aa25.09■■□□□ 1.61
AC009041.3-201ENST00000564390 GPR63Q9BZJ6 419 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms