RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 RGRP47804 291 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 NOVA1P51513 510 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 EPHB1P54762 984 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ECT2LQ008S8 904 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 RPL6Q02878 288 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ACVR1Q04771 509 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 SLC18A2Q05940 514 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 GALNT3Q14435 633 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 TAF1AQ15573 450 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 PTPRNQ16849 979 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 UAP1L1Q3KQV9 507 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 TEDDM1Q5T9Z0 273 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 LYSMD4Q5XG99 296 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 C22orf39Q6P5X5 142 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 KIAA1324Q6UXG2 1013 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 LPCAT2Q7L5N7 544 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 GLT6D1Q7Z4J2 308 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CCDC91Q7Z6B0 441 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 STRA8Q7Z7C7 330 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 KIAA0907Q7Z7F0 614 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ADIPOR2Q86V24 386 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 C4orf33Q8N1A6 199 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 PAF1Q8N7H5 531 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 BANPQ8N9N5 519 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 BLOC1S5Q8TDH9 187 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 PTPRN2Q92932 1015 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 MYO19Q96H55 970 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 HSPA12BQ96MM6 686 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 TRIM56Q9BRZ2 755 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 EPN3Q9H201 632 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 RHOJQ9H4E5 214 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CAPN10Q9HC96 672 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 RALYQ9UKM9 306 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 INTS6Q9UL03 887 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CORO1CQ9ULV4 474 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 GMNCA6NCL1 334 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 LDB2O43679 373 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 GLRA3O75311 464 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 MPOP05164 745 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 SRPRAP08240 638 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 GSTA1P08263 222 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 SRCP12931 536 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 ST8SIA6P61647 398 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 CNGA3Q16281 694 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 DBN1Q16643 649 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 HHATQ5VTY9 493 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 MRNIPQ6NTE8 343 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 NEPROQ6NW34 567 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 ESRP1Q6NXG1 681 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 CES3Q6UWW8 571 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 NUDT18Q6ZVK8 323 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 TAX1BP1Q86VP1 789 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 SYT12Q8IV01 421 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 ANKRD42Q8N9B4 389 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 KDM1BQ8NB78 822 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 LPCAT1Q8NF37 534 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 ISL2Q96A47 359 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF641Q96N77 438 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 TSNARE1Q96NA8 513 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 CAMK1GQ96NX5 476 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 CPEB1Q9BZB8 566 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 TMEM9BQ9NQ34 198 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 IARS2Q9NSE4 1012 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 USP36Q9P275 1121 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 DCDC2Q9UHG0 476 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 EVLQ9UI08 416 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
UBFD1-203ENST00000564106 FCF1Q9Y324 198 aaKnown RBP9.73□□□□□ -0.85
UBFD1-203ENST00000564106 PKD1L2Q7Z442 2459 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 DOCK9Q9BZ29 2069 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 NDUFAB1O14561 156 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 MAP3K13O43283 966 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 FZD6O60353 706 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SPAG7O75391 227 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 RFPL1O75677 317 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 GJB3O75712 270 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PIAS1O75925 651 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PGLSO95336 258 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 POP4O95707 220 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 FAM107AO95990 144 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 CFIP05156 583 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PYGBP11216 843 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 OGNP20774 298 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PSMA3P25788 255 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TYK2P29597 1187 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ARCN1P48444 511 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms