RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PDE1BQ01064 536 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 RELBQ01201 579 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PTSQ03393 145 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 DPTQ07507 201 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 CCDC173Q0VFZ6 552 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 BIRC2Q13490 618 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PARP6Q2NL67 630 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF569Q5MCW4 686 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 N4BP2L1Q5TBK1 243 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 DBX2Q6ZNG2 339 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 GLRX5Q86SX6 157 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 NLRP8Q86W28 1048 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 HEATR4Q86WZ0 1026 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 SLC22A18ASQ8N1D0 253 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 SDR16C5Q8N3Y7 309 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 FAM71DQ8N9W8 422 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PLA2G15Q8NCC3 412 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF548Q8NEK5 533 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 OR4C6Q8NH72 309 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 CCDC110Q8TBZ0 833 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 BLOC1S5Q8TDH9 187 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 POM121Q96HA1 1249 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PBKQ96KB5 322 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 NSMCE3Q96MG7 304 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 FICDQ9BVA6 458 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 RIOK2Q9BVS4 552 aaKnown RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 SPATA16Q9BXB7 569 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ABCG8Q9H221 673 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 C10orf88Q9H8K7 445 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 USP29Q9HBJ7 922 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 NLGN3Q9NZ94 848 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-223ENST00000557511 CD84Q9UIB8 345 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ANGPTL2Q9UKU9 493 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 SHOC2Q9UQ13 582 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PKP3Q9Y446 797 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF711Q9Y462 761 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PCDHB11Q9Y5F2 797 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 PCDH15Q96QU1 1955 aa8.3□□□□□ -1.08
PSEN1-223ENST00000557511 GOLGA6L10A0A0M3HER8 536 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TPP1O14773 563 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 STX7O15400 261 aaKnown RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ZW10O43264 779 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LIASO43766 372 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 PPFIA2O75334 1257 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 RFPL3O75679 317 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CRTAMO95727 393 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 FGGP02679 453 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 PIRTP0C851 137 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CKMT2P17540 419 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 PSMB4P28070 264 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TRIM23P36406 574 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 FDFT1P37268 417 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SPINT3P49223 89 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CDK3Q00526 305 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ILF3Q12906 894 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 EIF2B5Q13144 721 aaKnown RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 KLF1Q13351 362 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ILKQ13418 452 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SHBQ15464 509 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SLC1A5Q15758 541 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ZCCHC8Q6NZY4 707 aaKnown RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 DOK6Q6PKX4 331 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LVRNQ6Q4G3 990 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 KDELC1Q6UW63 502 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ADAMTSL4Q6UY14 1074 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LYSMD3Q7Z3D4 306 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TECPR1Q7Z6L1 1165 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TAF8Q7Z7C8 310 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LINC00523Q86TU6 105 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 GALNT15Q8N3T1 639 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 GDAP1Q8TB36 358 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SLC35B2Q8TB61 432 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 C1orf54Q8WWF1 131 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TSACCQ96A04 125 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 FUBP1Q96AE4 644 aaKnown RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 HIC2Q96JB3 615 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TRIB3Q96RU7 358 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TBL1YQ9BQ87 522 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TMEM121Q9BTD3 319 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ZSCAN5AQ9BUG6 496 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TEX101Q9BY14 249 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 GSDMCQ9BYG8 508 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 ABCG4Q9H172 646 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SUDS3Q9H7L9 328 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 LRRC40Q9H9A6 602 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
PSEN1-223ENST00000557511 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 GPR27Q9NS67 375 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 TRMT1Q9NXH9 659 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms