RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PTPRRQ15256 657 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 TCEA2Q15560 299 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 P3H1Q32P28 736 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 ZNF569Q5MCW4 686 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 CACTIN-AS1Q8N1I8 211 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 MAIP1Q8WWC4 291 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 SPATA13Q96N96 652 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 DEPDC7Q96QD5 511 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 TRIB3Q96RU7 358 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 FRMD8Q9BZ67 464 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-206ENST00000557358 CLPBQ9H078 707 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 RMI1Q9H9A7 625 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
VPS33B-206ENST00000557358 GPSM3Q9Y4H4 160 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 F5H423 210 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 PSMD3O43242 534 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 PPFIA2O75334 1257 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 CEACAM5P06731 702 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 PIRTP0C851 137 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 GIMD1P0DJR0 217 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 MSNP26038 577 aaKnown RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 CD68P34810 354 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 PDE1BQ01064 536 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 LRP8Q14114 963 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 IHHQ14623 411 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SLC1A5Q15758 541 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ST3GAL2Q16842 350 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ANKRD20A2Q5SQ80 823 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 HENMT1Q5T8I9 393 aaKnown RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ANKRD20A1Q5TYW2 823 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ANKRD20A3Q5VUR7 823 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ALS2CLQ60I27 953 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 GLT6D1Q7Z4J2 308 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SLC25A41Q8N5S1 370 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 TRAM1L1Q8N609 369 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 BLOC1S5Q8TDH9 187 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 ZCCHC14Q8WYQ9 949 aaKnown RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 NXPE2Q96DL1 559 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 OR2M4Q96R27 311 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 TMEM168Q9H0V1 697 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SYNDIG1Q9H7V2 258 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 VPS18Q9P253 973 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 SLC17A4Q9Y2C5 497 aa13.73□□□□□ -0.21
VPS33B-206ENST00000557358 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 A0A0U1RQS6 177 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 B4DGG1 531 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GPR89AB7ZAQ6 455 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 OPA1O60313 960 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 SLC25A14O95258 325 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GAS8O95995 478 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 MT-CO3P00414 261 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GPR89BP0CG08 455 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 HMGCLP35914 325 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GTF2H3Q13889 308 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 SIRPB2Q5JXA9 342 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 AADACL2Q6P093 401 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GUSBP11Q6P575 273 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 KDELC1Q6UW63 502 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GDAP1Q8TB36 358 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 GATA6Q92908 595 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 TTC25Q96NG3 672 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 CARD9Q9H257 536 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 STN1Q9H668 368 aaKnown RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 NFKBIL1Q9UBC1 381 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 ZNHIT2Q9UHR6 403 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 PNMA8BQ9ULN7 279 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-206ENST00000557358 LRP4O75096 1905 aa13.72□□□□□ -0.21
VPS33B-206ENST00000557358 ARHGEF17Q96PE2 2063 aaPredicted RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 CEP295Q9C0D2 2601 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 TCEA3O75764 348 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 CRTAMO95727 393 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 SLC2A4P14672 509 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 PSMB4P28070 264 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms