RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 HBEGFQ99075 208 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 NLE1Q9NVX2 485 aaPredicted RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 BNIP3LO60238 219 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 GJA1P17302 382 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 TNK2Q07912 1038 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 ZNF461Q8TAF7 563 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 CWH43Q9H720 699 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 A0A1B0GVM2 712 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 C2orf81A6NN90 581 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 ECI2O75521 394 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 EPOP01588 193 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 CR2P20023 1033 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 CHRM3P20309 590 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
FOXN3-214ENST00000557258 REP15Q6BDI9 236 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 IRGCQ6NXR0 463 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 SLAIN1Q8ND83 568 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 ATOH8Q96SQ7 321 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 SERPINI1Q99574 410 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 PCDHGA7Q9Y5G6 932 aa19.2■□□□□ 0.66
FOXN3-214ENST00000557258 A6NHS1 94 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 ANKRD66B4E2M5 251 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 HK2P52789 917 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 PSME3P61289 254 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 MRPS35P82673 323 aaKnown RBP19.19■□□□□ 0.66
FOXN3-214ENST00000557258 C18orf21Q32NC0 220 aaPredicted RBP19.19■□□□□ 0.66
FOXN3-214ENST00000557258 UGT3A1Q6NUS8 523 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 JADE3Q92613 823 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 CDK15Q96Q40 435 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 KLHL4Q9C0H6 718 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 TUBB1Q9H4B7 451 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 CACNA2D2Q9NY47 1150 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 UGT3A2Q3SY77 523 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 DNAJB7Q7Z6W7 309 aaPredicted RBP19.19■□□□□ 0.66
FOXN3-214ENST00000557258 PDSS2Q86YH6 399 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 CAMK1DQ8IU85 385 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 CPNE9Q8IYJ1 553 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 EEF1AKMT1Q8WVE0 214 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 TWIST2Q8WVJ9 160 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 EID2BQ96D98 161 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 ZNF599Q96NL3 588 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 BIRC8Q96P09 236 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 TMEM175Q9BSA9 504 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 ABCG8Q9H221 673 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 ZNF334Q9HCZ1 680 aaPredicted RBP19.19■□□□□ 0.66
FOXN3-214ENST00000557258 TAS2R13Q9NYV9 303 aa19.19■□□□□ 0.66
FOXN3-214ENST00000557258 CORO1CQ9ULV4 474 aaPredicted RBP19.19■□□□□ 0.66
FOXN3-214ENST00000557258 NR5A2O00482 541 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 NRG2O14511 850 aaPredicted RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 HOXA2O43364 376 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SMAD6O43541 496 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ME2P23368 584 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CA5AP35218 305 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TRIM60Q495X7 471 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TPGS1Q6ZTW0 290 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TMEM150AQ86TG1 271 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 LILRA2Q8N149 483 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 AFAP1L2Q8N4X5 818 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ACOX2Q99424 681 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SMG9Q9H0W8 520 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SEMA6AQ9H2E6 1030 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CLEC4EQ9ULY5 219 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ILVBLA1L0T0 632 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 STX7O15400 261 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 F11P03951 625 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CSKP41240 450 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 RHOAP61586 193 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CYP4F8P98187 520 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TLE2Q04725 743 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TAF1AQ15573 450 aaPredicted RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TYSND1Q2T9J0 566 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ALG1LQ6GMV1 187 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 LARP4Q71RC2 724 aaKnown RBP eCLIP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 FBXO39Q8N4B4 442 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 GPR150Q8NGU9 434 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 FAM110BQ8TC76 370 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 TUBGCP3Q96CW5 907 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 L3HYPDHQ96EM0 354 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 RNF208Q9H0X6 261 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 AFF4Q9UHB7 1163 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 PRPF19Q9UMS4 504 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SUFUQ9UMX1 484 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 PCDHGB4Q9UN71 923 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 PCDHGB5Q9Y5G0 923 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ANKRD36A6QL64 1941 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 LPOP22079 712 aaPredicted RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 C5orf22Q49AR2 442 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 VPS26BQ4G0F5 336 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CMPK2Q5EBM0 449 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 HABP4Q5JVS0 413 aaKnown RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 AFTPHQ6ULP2 937 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 CHSY3Q70JA7 882 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 APCDD1Q8J025 514 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 GALNT4Q8N4A0 578 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 ATP6V1E2Q96A05 226 aa19.18■□□□□ 0.66
FOXN3-214ENST00000557258 KLF16Q9BXK1 252 aaPredicted RBP19.18■□□□□ 0.66
FOXN3-214ENST00000557258 SLC24A3Q9HC58 644 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms