RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 TRIM55Q9BYV6 548 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 NDST4Q9H3R1 872 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 MAP4K5Q9Y4K4 846 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 PCDHGC4Q9Y5F7 938 aa13.83□□□□□ -0.2
ACTN1-219ENST00000556432 HIVEP3Q5T1R4 2406 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 EEF2KO00418 725 aaKnown RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 GFPT2O94808 682 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 NDUFA10O95299 355 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 UCHL3P15374 230 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 DESP17661 470 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 TNFRSF8P28908 595 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 SEPHS1P49903 392 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 EPHA4P54764 986 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 CDR2Q01850 454 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 MRPL49Q13405 166 aaKnown RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 ZNF235Q14590 738 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 RFTN1Q14699 578 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 VWA3BQ502W6 1294 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 SLC9B2Q86UD5 537 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 TSPAN33Q86UF1 283 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 ZNF677Q86XU0 584 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 AP2M1Q96CW1 435 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 SCARF2Q96GP6 870 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 OR6C1Q96RD1 312 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 GPATCH2LQ9NWQ4 482 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 SIDT1Q9NXL6 827 aaKnown RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 LUZP4Q9P127 313 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 NOCTQ9UK39 431 aaKnown RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 PRKAB1Q9Y478 270 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 MED13Q9UHV7 2174 aa13.82□□□□□ -0.2
ACTN1-219ENST00000556432 TNRC6AQ8NDV7 1962 aaKnown RBP13.82□□□□□ -0.2
ACTN1-219ENST00000556432 C2CD3Q4AC94 2353 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 A0A1W2PQ67 120 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 NPIPB15A6NHN6 443 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 RASSF9O75901 435 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 CLDN1O95832 211 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 CYP1A1P04798 512 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 SLC2A4P14672 509 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TNFAIP3P21580 790 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 LHCGRP22888 699 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TEAD1P28347 426 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 HTR7P34969 479 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 GARSP41250 739 aaKnown RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 AIF1P55008 147 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 GFERP55789 205 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 FMO1Q01740 532 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 SEMA5AQ13591 1074 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 DNASE1L3Q13609 305 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 INPP5JQ15735 1006 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 PRR30Q53SZ7 412 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 HSP90AA4PQ58FG1 418 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TMCO4Q5TGY1 634 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 ADAMTSL4Q6UY14 1074 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TRIM72Q6ZMU5 477 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 ARHGAP36Q6ZRI8 547 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 USP45Q70EL2 814 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 CHST15Q7LFX5 561 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 APLFQ8IW19 511 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 MCEEQ96PE7 176 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TGM7Q96PF1 710 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 HERPUD2Q9BSE4 406 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 STK33Q9BYT3 514 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 EPB41L1Q9H4G0 881 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 SLAMF7Q9NQ25 335 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 SEPT11Q9NVA2 429 aaKnown RBP13.81□□□□□ -0.2
ACTN1-219ENST00000556432 TBC1D29Q9UFV1 150 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 PHTF1Q9UMS5 762 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 KCNK6Q9Y257 313 aa13.81□□□□□ -0.2
ACTN1-219ENST00000556432 A0A0U1RQS6 177 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 PSMD11O00231 422 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 HTRA2O43464 458 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 SOCS5O75159 536 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CALB1P05937 261 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ANKRD34CP0C6C1 535 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ACP5P13686 325 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CTPS1P17812 591 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ELAVL4P26378 380 aaKnown RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CCL11P51671 97 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 SH3BP2P78314 561 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 IL10RBQ08334 325 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CHAF1BQ13112 559 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 LBRQ14739 615 aaKnown RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 PTPRRQ15256 657 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CPZQ66K79 652 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 RFLNAQ6ZTI6 216 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms