RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PCDHB8Q9UN66 801 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 E9PAM4 449 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 G3V2L1 256 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 HS6ST1O60243 411 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 TULP3O75386 442 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PENKP01210 267 aaPredicted RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 ESR1P03372 595 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ASLP04424 464 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PFKMP08237 780 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ZNF12P17014 697 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PSMB9P28065 219 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 HERVK_113P63132 956 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 DSC2Q02487 901 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SLC10A7Q0GE19 358 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 TSNQ15631 228 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 RBM20Q5T481 1227 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 ZNF618Q5T7W0 954 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PPP4R4Q6NUP7 873 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 HORMAD1Q86X24 394 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PROSER1Q86XN7 944 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ATAD1Q8NBU5 361 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MCOLN3Q8TDD5 553 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 RAB2BQ8WUD1 216 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PPP1R13LQ8WUF5 828 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SELENOMQ8WWX9 145 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 TMEM169Q96HH4 297 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ERVK-6Q9BXR3 956 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 DGCR6LQ9BY27 220 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MAGEH1Q9H213 219 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 AKTIPQ9H8T0 292 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 WDR6Q9NNW5 1121 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 PADI3Q9ULW8 664 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ARAP2Q8WZ64 1704 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 RREB1Q92766 1687 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 LCHNA4D1U4 455 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PRORSD1PA6NEY8 169 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 UBXN8O00124 270 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CCL22O00626 93 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PIP5K1BO14986 540 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SPTLC1O15269 473 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 GRID2O43424 1007 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 HTRA2O43464 458 aaPredicted RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 HCRTO43612 131 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CNOT3O75175 753 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 ZNF682O95780 498 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PGK1P00558 417 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MT-ND1P03886 318 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 C7P10643 843 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 UROSP10746 265 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 THRBP10828 461 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 TYMPP19971 482 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 DGKAP23743 735 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CDK9P50750 372 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 ERVK-8P63133 956 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ITGADQ13349 1161 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ATP1A4Q13733 1029 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PITRM1Q5JRX3 1037 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ARMC12Q5T9G4 340 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 BORAQ6PGQ7 559 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 GLB1L3Q8NCI6 653 aaPredicted RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 SCAMP5Q8TAC9 235 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 RNF217Q8TC41 542 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 KBTBD7Q8WVZ9 684 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SOCS4Q8WXH5 440 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 LPPQ93052 612 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 LRRC58Q96CX6 371 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PGAP3Q96FM1 320 aaPredicted RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 UROC1Q96N76 676 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 FOPNLQ96NB1 174 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 GPR21Q99679 349 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SLC39A3Q9BRY0 314 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MFSD1Q9H3U5 465 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CACYBPQ9HB71 228 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 CCNB1IP1Q9NPC3 277 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CRTAC1Q9NQ79 661 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CCM2LQ9NUG4 571 aaPredicted RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 FAM8A1Q9UBU6 413 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SNX10Q9Y5X0 201 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MRPL42Q9Y6G3 142 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 SPTA1P02549 2419 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 SCN7AQ01118 1682 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 OR6C75A6NL08 312 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CLDN25C9JDP6 229 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 BTBD19C9JJ37 291 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 C9JVG2 144 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 FAM72CH0Y354 149 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 HOXA2O43364 376 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 ZNF623O75123 536 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CLDN11O75508 207 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MED26O95402 600 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CKMP06732 381 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
KTN1-217ENST00000554831 GMPRP36959 345 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CAPGP40121 348 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 MAPK8P45983 427 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 PRIM2P49643 509 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 IRF8Q02556 426 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 TAF10Q12962 218 aa3.88□□□□□ -1.79
KTN1-217ENST00000554831 CPSF6Q16630 551 aaKnown RBP eCLIP3.88□□□□□ -1.79
KTN1-217ENST00000554831 ZNF829Q3KNS6 432 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms