RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CKMT1AP12532 417 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 EPHB2P29323 1055 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 IFI35P80217 286 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-209ENST00000553659 AP1B1Q10567 949 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 CDCP2Q5VXM1 449 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 C3orf62Q6ZUJ4 267 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 ERN2Q76MJ5 926 aaKnown RBP16.05■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 CCNYQ8ND76 341 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 OR13H1Q8NG92 308 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 TBC1D31Q96DN5 1066 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 IFT43Q96FT9 208 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 C1orf74Q96LT6 269 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 HDAC8Q9BY41 377 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 FZD3Q9NPG1 666 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 ANLNQ9NQW6 1124 aa16.05■□□□□ 0.16
ACTN1-209ENST00000553659 ZFR2Q9UPR6 939 aaKnown RBP16.05■□□□□ 0.16
ACTN1-209ENST00000553659 A0A0D9SEW6 157 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 TCRBV7S3A2A0A539 114 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 NEMP2A6NFY4 417 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ERICH4A6NGS2 130 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 RNF103O00237 685 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 NDUFAB1O14561 156 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 PSMD3O43242 534 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 LRIG2O94898 1065 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 PCDH8O95206 1070 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 FAM107AO95990 144 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ALPPL2P10696 532 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 CHN1P15882 459 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ELK3P41970 407 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 MAGEA3P43357 314 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 GPX6P59796 221 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 TLE3Q04726 772 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 UBAP2Q5T6F2 1119 aaKnown RBP16.04■□□□□ 0.16
ACTN1-209ENST00000553659 GCNT7Q6ZNI0 430 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 CYS1Q717R9 158 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 B4GALNT4Q76KP1 1039 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ABI3BPQ7Z7G0 1075 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 DCP2Q8IU60 420 aaKnown RBP16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ANKMY2Q8IV38 441 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 SPACA3Q8IXA5 215 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 DCAF4L2Q8NA75 395 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 CHST14Q8NCH0 376 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 MAML1Q92585 1016 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
ACTN1-209ENST00000553659 SGSM3Q96HU1 749 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 NKIRAS1Q9NYS0 192 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 NLGN3Q9NZ94 848 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 IL36AQ9UHA7 158 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 HS3ST3A1Q9Y663 406 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 IKBKGQ9Y6K9 419 aa16.04■□□□□ 0.16
ACTN1-209ENST00000553659 SMG1Q96Q15 3661 aaKnown RBP16.04■□□□□ 0.16
ACTN1-209ENST00000553659 IQANK1A0A1B0GTG1 560 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 I6L893 689 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 SCAMP1O15126 338 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 CPP00450 1065 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 GP1BAP07359 652 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 BRAFP15056 766 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 MSH2P43246 934 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 RECQLP46063 649 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 DUSP3P51452 185 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 CLDN2P57739 230 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 TMED2Q15363 201 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 MSS51Q4VC12 460 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 TMEM259Q4ZIN3 620 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 LGSNQ5TDP6 509 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 LRRC8BQ6P9F7 803 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 LINGO4Q6UY18 593 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 Q6ZSR6 202 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 MICALCLQ6ZW33 695 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 NLRP14Q86W24 1093 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 LSMEM2Q8N112 164 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 FAM181AQ8N9Y4 354 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 PPP1R16AQ96I34 528 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 BMFQ96LC9 184 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF578Q96N58 590 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 DEPDC7Q96QD5 511 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 LGMNQ99538 433 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 DHRS4Q9BTZ2 278 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 FAM107BQ9H098 131 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 NSRP1Q9H0G5 558 aaKnown RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 RETREG1Q9H6L5 497 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 KLHL8Q9P2G9 620 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 ZC3H7BQ9UGR2 993 aaKnown RBP16.03■□□□□ 0.16
ACTN1-209ENST00000553659 CHMP2BQ9UQN3 213 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 PCDHB1Q9Y5F3 818 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 SNX10Q9Y5X0 201 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 CHD5Q8TDI0 1954 aa16.03■□□□□ 0.16
ACTN1-209ENST00000553659 GCN1Q92616 2671 aaKnown RBP16.02■□□□□ 0.16
ACTN1-209ENST00000553659 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 RASA4BC9J798 803 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms