RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 DRG1Q9Y295 367 aaKnown RBP18.36■□□□□ 0.53
CPSF2-202ENST00000553427 CES2O00748 559 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 AURKAO14965 403 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 PSMD3O43242 534 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 PPFIA2O75334 1257 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 METTL18O95568 372 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 AGTP01019 485 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CEACAM5P06731 702 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CDK4P11802 303 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 BPIP17213 487 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CKMT2P17540 419 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CXCR5P32302 372 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 ACADVLP49748 655 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 KCTD16Q68DU8 428 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 RAB44Q7Z6P3 723 aaPredicted RBP18.35■□□□□ 0.53
CPSF2-202ENST00000553427 SLCO6A1Q86UG4 719 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 TRAM1L1Q8N609 369 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 GPR26Q8NDV2 337 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 TBL1YQ9BQ87 522 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CLPBQ9H078 707 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 LRRC40Q9H9A6 602 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 EVA1BQ9NVM1 165 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 IL17CQ9P0M4 197 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 VPS18Q9P253 973 aa18.35■□□□□ 0.53
CPSF2-202ENST00000553427 CNOT6Q9ULM6 557 aaKnown RBP18.35■□□□□ 0.53
CPSF2-202ENST00000553427 ERI2A8K979 691 aaKnown RBP18.34■□□□□ 0.53
CPSF2-202ENST00000553427 FADS2P1A8MWK0 482 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 AP2A1O95782 977 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 ANXA6P08133 673 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 CKMT1AP12532 417 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 CTSEP14091 401 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 ACP1P24666 158 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 FDFT1P37268 417 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 LONRF2Q1L5Z9 754 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 DENND5AQ6IQ26 1287 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 GLT6D1Q7Z4J2 308 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 BLOC1S5Q8TDH9 187 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
CPSF2-202ENST00000553427 BOCQ9BWV1 1114 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 TRNAU1APQ9NX07 287 aaKnown RBP18.34■□□□□ 0.53
CPSF2-202ENST00000553427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.34■□□□□ 0.53
CPSF2-202ENST00000553427 PYCARDQ9ULZ3 195 aa18.34■□□□□ 0.53
CPSF2-202ENST00000553427 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.53
CPSF2-202ENST00000553427 LY6G6EA0A0G2JKS1 128 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 YY2O15391 372 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 SLC4A1P02730 911 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 ATP1A1P05023 1023 aaKnown RBP18.33■□□□□ 0.52
CPSF2-202ENST00000553427 ACTN2P35609 894 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 MSLNQ13421 630 aaPredicted RBP18.33■□□□□ 0.52
CPSF2-202ENST00000553427 TAF1AQ15573 450 aaPredicted RBP18.33■□□□□ 0.52
CPSF2-202ENST00000553427 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 C4orf22Q6V702 233 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 NYAP1Q6ZVC0 841 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 RD3Q7Z3Z2 195 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 GKN2Q86XP6 184 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 PRELID2Q8N945 189 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 SCG3Q8WXD2 468 aaKnown RBP18.33■□□□□ 0.52
CPSF2-202ENST00000553427 APOLD1Q96LR9 279 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 CYP4F12Q9HCS2 524 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 MRPL40Q9NQ50 206 aaKnown RBP18.33■□□□□ 0.52
CPSF2-202ENST00000553427 PAK5Q9P286 719 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 SNX12Q9UMY4 172 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 U3KQA8 63 aa18.33■□□□□ 0.52
CPSF2-202ENST00000553427 TDRD6O60522 2096 aaKnown RBP18.32■□□□□ 0.52
CPSF2-202ENST00000553427 USP27XA6NNY8 438 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 RFPL3O75679 317 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 IFNB1P01574 187 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 CELA2BP08218 269 aaPredicted RBP18.32■□□□□ 0.52
CPSF2-202ENST00000553427 DUSP3P51452 185 aaPredicted RBP18.32■□□□□ 0.52
CPSF2-202ENST00000553427 PDE1BQ01064 536 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 C1orf61Q13536 156 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 SEMA5AQ13591 1074 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 SNX1Q13596 522 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 DEFB133Q30KQ1 61 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 ALS2CLQ60I27 953 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 CCDC89Q8N998 374 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 BRSK1Q8TDC3 778 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 GPBAR1Q8TDU6 330 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 GLMNQ92990 594 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 VPS35Q96QK1 796 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 OSBPL9Q96SU4 736 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 APOL2Q9BQE5 337 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 SPATA16Q9BXB7 569 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 RMI1Q9H9A7 625 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 CARS2Q9HA77 564 aaKnown RBP18.32■□□□□ 0.52
CPSF2-202ENST00000553427 KCND1Q9NSA2 647 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 SUFUQ9UMX1 484 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 PKP3Q9Y446 797 aa18.32■□□□□ 0.52
CPSF2-202ENST00000553427 C2orf81A6NN90 581 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 GPR89AB7ZAQ6 455 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 PGRMC1O00264 195 aaKnown RBP18.31■□□□□ 0.52
CPSF2-202ENST00000553427 INPP4BO15327 924 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 SUN1O94901 812 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 FUCA1P04066 466 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 GP1BAP07359 652 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 GPR89BP0CG08 455 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 SPAM1P38567 509 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 RPIAP49247 311 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 FOXC1Q12948 553 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 DNAJC3Q13217 504 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms