RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 FOXA1P55317 472 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 OXCT1P55809 520 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 MAXP61244 160 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 PFKFB4Q16877 469 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 TRIM16LQ309B1 348 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 SLC36A3Q495N2 470 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 DHRS4L2Q6PKH6 230 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 PARP8Q8N3A8 854 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 MCMBPQ9BTE3 642 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 CMTM6Q9NX76 183 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 SMPD3Q9NY59 655 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 MAGED1Q9Y5V3 778 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 INHAP05111 366 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PFKPQ01813 784 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PIGFQ07326 219 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PPP1R8Q12972 351 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 IMPG1Q17R60 797 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ANKRD26P1Q6NSI1 321 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 FAM45BPQ6NSW5 357 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 FAM45AQ8TCE6 357 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 SH3RF2Q8TEC5 729 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 SGCDQ92629 289 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 MUS81Q96NY9 551 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 NSUN5Q96P11 429 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 KCTD14Q9BQ13 255 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 CCDC90BQ9GZT6 254 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 AGPAT4Q9NRZ5 378 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 GID8Q9NWU2 228 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ZNHIT2Q9UHR6 403 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 DERAQ9Y315 318 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TCAF1Q9Y4C2 921 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TIMM22Q9Y584 194 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TMEM247A6NEH6 219 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 KPNA6O60684 536 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 GFAPP14136 432 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 POLR2IP36954 125 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ARCN1P48444 511 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 DIO3P55073 304 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 POU4F1Q01851 419 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 GALNT2Q10471 571 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 NFATC3Q12968 1075 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 MTA1Q13330 715 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TMEM53Q6P2H8 277 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PAQR9Q6ZVX9 377 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 MIER2Q8N344 545 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 PTGR2Q8N8N7 351 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 NCF1BA6NI72 391 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 NCF1CA8MVU1 366 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 RSL1D1O76021 490 aaKnown RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 LDLRP01130 860 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 RBP1P09455 135 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 NCF1P14598 390 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 CAPGP40121 348 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 SH3BP2P78314 561 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TNK2Q07912 1038 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 RGS21Q2M5E4 152 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 LHX8Q68G74 356 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 LARP4Q71RC2 724 aaKnown RBP eCLIP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 RALGPS2Q86X27 583 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 LRRC58Q96CX6 371 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF560Q96MR9 790 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TMEM209Q96SK2 561 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 UHRF1Q96T88 793 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 CORO1BQ9BR76 489 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 TUBA8Q9NY65 449 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-230ENST00000552960 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 DAPK2Q9UIK4 370 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 DNAJC15Q9Y5T4 150 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 ST14Q9Y5Y6 855 aa12.32□□□□□ -0.44
HDAC7-230ENST00000552960 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 GPX3P22352 226 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 PSMD8P48556 350 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 TMTC4Q5T4D3 741 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 HECTD2Q5U5R9 776 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 TBPL2Q6SJ96 375 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 CYHR1Q6ZMK1 362 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 TRPV3Q8NET8 790 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 DQX1Q8TE96 717 aaKnown RBP12.31□□□□□ -0.44
HDAC7-230ENST00000552960 TANKQ92844 425 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 ACDQ96AP0 544 aa12.31□□□□□ -0.44
HDAC7-230ENST00000552960 PABPC5Q96DU9 382 aaKnown RBP12.31□□□□□ -0.44
HDAC7-230ENST00000552960 CCDC126Q96EE4 140 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms