RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	FUCA1	P04066	466 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	PROS1	P07225	676 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	ANXA6	P08133	673 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	PIRT	P0C851	137 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	RBP3	P10745	1247 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	MYCLP1	P12525	358 aa	Predicted RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	NFKB1	P19838	968 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	KEL	P23276	732 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	RBL1	P28749	1068 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	GPR1	P46091	355 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CDK3	Q00526	305 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CDK18	Q07002	472 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	DPT	Q07507	201 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	ILK	Q13418	452 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	SLC14A2	Q15849	920 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CYP1B1	Q16678	543 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	RAET1G	Q6H3X3	334 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	PID1	Q7Z2X4	250 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	GALNT15	Q8N3T1	639 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	FSTL5	Q8N475	847 aa	Predicted RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	PRELID2	Q8N945	189 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CCL4L1	Q8NHW4	92 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	PTCD2	Q8WV60	388 aa	Known RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	C1orf54	Q8WWF1	131 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	EID2B	Q96D98	161 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	RUNDC3B	Q96NL0	473 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	RIOK2	Q9BVS4	552 aa	Known RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	BOC	Q9BWV1	1114 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	CYP4F12	Q9HCS2	524 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	MOSPD1	Q9UJG1	213 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	DNPEP	Q9ULA0	475 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	DOLK	Q9UPQ8	538 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	ZNF148	Q9UQR1	794 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	MRFAP1	Q9Y605	127 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	DGKB	Q9Y6T7	804 aa		11.21	□□□□□ -0.61
BRF1-218	ENST00000550692	ASXL3	Q9C0F0	2248 aa		11.21	□□□□□ -0.62
BRF1-218	ENST00000550692	IGF2R	P11717	2491 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	LIAS	O43766	372 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	STK10	O94804	968 aa	Known RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	CEACAM5	P06731	702 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	CDK4	P11802	303 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	JUP	P14923	745 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	TEAD1	P28347	426 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	POLD2	P49005	469 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SPINT3	P49223	89 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	DUSP3	P51452	185 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	WNT3A	P56704	352 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	INSM1	Q01101	510 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SNX1	Q13596	522 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	ELOC	Q15369	112 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	C6orf132	Q5T0Z8	1188 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	HES3	Q5TGS1	186 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	GUSBP11	Q6P575	273 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	KDELC1	Q6UW63	502 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	ZNF765	Q7L2R6	523 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	LYSMD3	Q7Z3D4	306 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	TRIM74	Q86UV6	250 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	NLRP8	Q86W28	1048 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	TMPRSS12	Q86WS5	348 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SLC35F3	Q8IY50	421 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	CEP112	Q8N8E3	955 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SPATA4	Q8NEY3	305 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	ATG4A	Q8WYN0	398 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	FCRL5	Q96RD9	977 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	VAT1	Q99536	393 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	TMEM168	Q9H0V1	697 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	USP29	Q9HBJ7	922 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SMARCAL1	Q9NZC9	954 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	FAM153A	Q9UHL3	310 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	SHOC2	Q9UQ13	582 aa		11.2	□□□□□ -0.62
BRF1-218	ENST00000550692	RP1	P56715	2156 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	LOC285095	A0A1B0GVY8	99 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	PRSS38	A1L453	326 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	CPED1	A4D0V7	1026 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	EME2	A4GXA9	379 aa	Predicted RBP	11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	PHF2	O75151	1096 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	NDST3	O95803	873 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	COIL	P38432	576 aa	Predicted RBP	11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	FNTA	P49354	379 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	E2F1	Q01094	437 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	CAMK2B	Q13554	666 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	NR0B2	Q15466	257 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	OASL	Q15646	514 aa	Known RBP	11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	CCDC70	Q6NSX1	233 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	DOK6	Q6PKX4	331 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	LVRN	Q6Q4G3	990 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	ADAMTSL4	Q6UY14	1074 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	TAF8	Q7Z7C8	310 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	GKN2	Q86XP6	184 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	SFTPA2	Q8IWL1	248 aa		11.19	□□□□□ -0.62
BRF1-218	ENST00000550692	NRSN1	Q8IZ57	195 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms