RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 OR1D2P34982 312 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 KPNA2P52292 529 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 EPHB3P54753 998 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SNX16P57768 344 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 MARCH8Q5T0T0 291 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 B3GNT9Q6UX72 402 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CYP4V2Q6ZWL3 525 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CMC1Q7Z7K0 106 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 WDR49Q8IV35 697 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ADGRF2Q8IZF7 708 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 EFHBQ8N7U6 833 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ASCC1Q8N9N2 400 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 RASSF5Q8WWW0 418 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 TFAP2BQ92481 460 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SEPT5Q99719 369 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 MED10Q9BTT4 135 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 BDH2Q9BUT1 245 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SLC25A23Q9BV35 468 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 MROQ9BYG7 248 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 NXF3Q9H4D5 531 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 SFXN1Q9H9B4 322 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 PLEKHA5Q9HAU0 1116 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ACSS2Q9NR19 701 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SMOXQ9NWM0 555 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.67□□□□□ -1.02
DDB1-217ENST00000540166 BFARQ9NZS9 450 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ARHGAP28Q9P2N2 729 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 TJP2Q9UDY2 1190 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 EGFL7Q9UHF1 273 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CDH7Q9ULB5 785 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 PTPRJQ12913 1337 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 DCKP27707 260 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SLC11A1P49279 550 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CCT8P50990 548 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CRADDP78560 199 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 HTRA4P83105 476 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 DGCR6Q14129 220 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 E2F2Q14209 437 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 IMPG1Q17R60 797 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 INSCQ1MX18 579 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 LEXMQ3ZCV2 418 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 UGT3A1Q6NUS8 523 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 BRSK2Q8IWQ3 736 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 C8orf59Q8N0T1 100 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 PACRGLQ8N7B6 248 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ZNF669Q96BR6 464 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 TMEM175Q9BSA9 504 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CORINQ9Y5Q5 1042 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 FAM172BPA6NC97 362 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ZNF197O14709 1029 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 USP12O75317 370 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 MT-CO1P00395 513 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 GALTP07902 379 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 TFEBP19484 476 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 GRIA4P48058 902 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 WNT7BP56706 349 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CAPSQ13938 189 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 UBXN2BQ14CS0 331 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 HSF5Q4G112 596 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 UBE2UQ5VVX9 321 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 PLEKHG7Q6ZR37 379 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 STK32CQ86UX6 486 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CCDC117Q8IWD4 279 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 TUBA1CQ9BQE3 449 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CNPY3Q9BT09 278 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 CENPOQ9BU64 300 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 HPS4Q9NQG7 708 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 SUCOQ9UBS9 1254 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 UBQLN1Q9UMX0 589 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 EI24O14681 340 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 SNRPB2P08579 225 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 GNAO1P09471 354 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 RPS3AP61247 264 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 CAMK2BQ13554 666 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PCLAFQ15004 111 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 OXA1LQ15070 435 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PDK2Q15119 407 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 AGAP7PQ5VUJ5 663 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PPP4R4Q6NUP7 873 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 KIAA0408Q6ZU52 694 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 GRPEL2Q8TAA5 225 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 ZNF560Q96MR9 790 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 CPXM1Q96SM3 734 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 NAT9Q9BTE0 207 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 BRD9Q9H8M2 597 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PNPLA8Q9NP80 782 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDB1-217ENST00000540166 MKS1Q9NXB0 559 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TRIP12Q14669 1992 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms