RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ANKRD20A3Q5VUR7 823 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
PRKDC-206ENST00000536429 TMC3Q7Z5M5 1100 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 TAF8Q7Z7C8 310 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GALNT15Q8N3T1 639 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GPR26Q8NDV2 337 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 COX14Q96I36 57 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ARFGAP3Q9NP61 516 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 PLXNB3Q9ULL4 1909 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 EME2A4GXA9 379 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 GOLGA6L3A6NEY3 463 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 PDE2AO00408 941 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 OPA1O60313 960 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 AGTP01019 485 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 CAPNS1P04632 268 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 PROS1P07225 676 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 JUPP14923 745 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 BPIP17213 487 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 AK4P27144 223 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 GDF10P55107 478 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 TARDBPQ13148 414 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 MPP3Q13368 585 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 MEI1Q5TIA1 1274 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 ZNF662Q6ZS27 426 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 GKN2Q86XP6 184 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 TTC30BQ8N4P2 665 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 ARL10Q8N8L6 244 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 FAM71DQ8N9W8 422 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 SLC35B2Q8TB61 432 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 SCARF2Q96GP6 870 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 HIC2Q96JB3 615 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 SPATA13Q96N96 652 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 APOL2Q9BQE5 337 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 FICDQ9BVA6 458 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 SPATS2LQ9NUQ6 558 aaKnown RBP13.08□□□□□ -0.32
PRKDC-206ENST00000536429 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 PRKAB1Q9Y478 270 aa13.08□□□□□ -0.32
PRKDC-206ENST00000536429 LRP4O75096 1905 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 RGSL1A5PLK6 1076 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 BUD23O43709 281 aaKnown RBP13.07□□□□□ -0.32
PRKDC-206ENST00000536429 NOBOXO60393 691 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 MT-CO3P00414 261 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 EPOP01588 193 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
PRKDC-206ENST00000536429 IVLP07476 585 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 ADRA1AP35348 466 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 ADCY8P40145 1251 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
PRKDC-206ENST00000536429 SPARCL1Q14515 664 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 PTPRCAPQ14761 206 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 CDCP2Q5VXM1 449 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 ITPRIPL1Q6GPH6 555 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 CCDC70Q6NSX1 233 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 LVRNQ6Q4G3 990 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
PRKDC-206ENST00000536429 FAM46DQ8NEK8 389 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 MAPK15Q8TD08 544 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 BLOC1S5Q8TDH9 187 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 TMEM121Q9BTD3 319 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 SPATA16Q9BXB7 569 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 TMPRSS11EQ9UL52 423 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 GPSM3Q9Y4H4 160 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 PTPRBP23467 1997 aa13.07□□□□□ -0.32
PRKDC-206ENST00000536429 APC2O95996 2303 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TRABD2BA6NFA1 517 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 B4DGG1 531 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TAF4O00268 1085 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 GPR39O43194 453 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 DNAJC6O75061 913 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 USP12O75317 370 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 METTL18O95568 372 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 ASMTLO95671 621 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 GP1BAP07359 652 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CDK4P11802 303 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 HLA-DPA1P20036 260 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CA5AP35218 305 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 GEMP55040 296 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 DCDC1P59894 354 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms