RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SULT2A1Q06520 285 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 GPM6BQ13491 265 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 SETDB1Q15047 1291 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 ARHGAP15Q53QZ3 475 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 LIPMQ5VYY2 423 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 C16orf46Q6P387 395 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 LINGO4Q6UY18 593 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 GPR149Q86SP6 731 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 NPAS3Q8IXF0 933 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 FSTL5Q8N475 847 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-212ENST00000535941 TMEM237Q96Q45 408 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 SMIM14Q96QK8 99 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 ATOH8Q96SQ7 321 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 MRPL57Q9BQC6 102 aaKnown RBP7.97□□□□□ -1.13
COL21A1-212ENST00000535941 CATSPERZQ9NTU4 200 aa7.97□□□□□ -1.13
COL21A1-212ENST00000535941 MTF2Q9Y483 593 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-212ENST00000535941 CCDC195A0A1B0GUA6 201 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 A0A1W2PQ67 120 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 OR51F1A6NGY5 319 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 H0Y3Z8 333 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 GOLGA8TH3BQL2 631 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 DLX3O60479 287 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 POU3F3P20264 500 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-212ENST00000535941 ATP6V1C1P21283 382 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 LPOP22079 712 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-212ENST00000535941 TYK2P29597 1187 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 PBX2P40425 430 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 ABCE1P61221 599 aaKnown RBP7.96□□□□□ -1.13
COL21A1-212ENST00000535941 NTHL1P78549 312 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 CDH18Q13634 790 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 CHI3L2Q15782 390 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 RETSATQ6NUM9 610 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 XKR5Q6UX68 686 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 RNF165Q6ZSG1 346 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 ISCA2Q86U28 154 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 C12orf40Q86WS4 652 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 OR2A12Q8NGT7 310 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 SLC7A6OSQ96CW6 309 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-212ENST00000535941 IFT43Q96FT9 208 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 DERL2Q9GZP9 239 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 SAR1AQ9NR31 198 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 FBXO6Q9NRD1 293 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-212ENST00000535941 KLHL42Q9P2K6 505 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 ATXN10Q9UBB4 475 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 IKZF3Q9UKT9 509 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 RABL2BQ9UNT1 228 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.13
COL21A1-212ENST00000535941 TYW5A2RUC4 315 aaKnown RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CKMP06732 381 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PABPC1P11940 636 aaKnown RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 STMN1P16949 149 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 FOXD4Q12950 439 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PTPRCAPQ14761 206 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PSAPL1Q6NUJ1 521 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 EPGNQ6UW88 154 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PIANPQ8IYJ0 282 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 HEXDCQ8WVB3 486 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 DNAJC9Q8WXX5 260 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SLC13A1Q9BZW2 595 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 HPS4Q9NQG7 708 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 GDE1Q9NZC3 331 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 VPS28Q9UK41 221 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PCDHGC4Q9Y5F7 938 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CTSLP07711 333 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 TYRP14679 529 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CPA3P15088 417 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ZNF24P17028 368 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SLC1A6P48664 564 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SESN3P58005 492 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 RALGDSQ12967 914 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ZNF460Q14592 562 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CCDC6Q16204 474 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 MYLK3Q32MK0 819 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SH2D4BQ5SQS7 431 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ATXN7L2Q5T6C5 722 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SYCE2Q6PIF2 218 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CYHR1Q6ZMK1 362 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 GLT6D1Q7Z4J2 308 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 GRASPQ7Z6J2 395 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 CLNKQ7Z7G1 428 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 EFHBQ8N7U6 833 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 TXNDC5Q8NBS9 432 aaKnown RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 C17orf50Q8WW18 174 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 PTERQ96BW5 349 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 SCRN2Q96FV2 425 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 TRAPPC9Q96Q05 1148 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 RAB3IPQ96QF0 476 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 LRMDAQ9H2I8 198 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 LINC00597Q9H2U6 94 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 TMEM245Q9H330 911 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ZNF395Q9H8N7 513 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 TMPRSS11EQ9UL52 423 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ERVW-1Q9UQF0 538 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 VWA7Q9Y334 891 aa7.96□□□□□ -1.14
COL21A1-212ENST00000535941 ZFC3H1O60293 1989 aaKnown RBP7.96□□□□□ -1.14
COL21A1-212ENST00000535941 LAMA3Q16787 3333 aa7.95□□□□□ -1.14
COL21A1-212ENST00000535941 UNC5CO95185 931 aa7.95□□□□□ -1.14
COL21A1-212ENST00000535941 NAT2P11245 290 aa7.95□□□□□ -1.14
COL21A1-212ENST00000535941 GSTT1P30711 240 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms