RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ANGPTL2Q9UKU9 493 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 FAM221BA6H8Z2 402 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 YY2O15391 372 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 HYAL3O43820 417 aaPredicted RBP20.33■□□□□ 0.84
CCS-208ENST00000533244 IVLP07476 585 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 CTSEP14091 401 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 BPIP17213 487 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 ILKQ13418 452 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 MSLNQ13421 630 aaPredicted RBP20.33■□□□□ 0.84
CCS-208ENST00000533244 GSE1Q14687 1217 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 CCNG2Q16589 344 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 P3H1Q32P28 736 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 C6orf132Q5T0Z8 1188 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 DRICH1Q6PGQ1 229 aaPredicted RBP20.33■□□□□ 0.84
CCS-208ENST00000533244 LVRNQ6Q4G3 990 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 CHCHD4Q8N4Q1 142 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 PTCD2Q8WV60 388 aaKnown RBP20.33■□□□□ 0.84
CCS-208ENST00000533244 ARNT2Q9HBZ2 717 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 CYP4F12Q9HCS2 524 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 ZKSCAN5Q9Y2L8 839 aa20.33■□□□□ 0.84
CCS-208ENST00000533244 RFPL3O75679 317 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 FGGP02679 453 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 ANXA6P08133 673 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 CXCR5P32302 372 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 OLIG2Q13516 323 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 PDPK2PQ6A1A2 396 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 DENND5AQ6IQ26 1287 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 TRAM1L1Q8N609 369 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 MAIP1Q8WWC4 291 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 PLEKHG4BQ96PX9 1271 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 ZSCAN5AQ9BUG6 496 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 SCNM1Q9BWG6 230 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 TMEM168Q9H0V1 697 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 IL17CQ9P0M4 197 aa20.32■□□□□ 0.84
CCS-208ENST00000533244 SLC4A1P02730 911 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 CDK4P11802 303 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 POLD2P49005 469 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 GLT6D1Q7Z4J2 308 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 TRIM74Q86UV6 250 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 GKN2Q86XP6 184 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 DTX3LQ8TDB6 740 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 BLOC1S5Q8TDH9 187 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 APOL2Q9BQE5 337 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 CARS2Q9HA77 564 aaKnown RBP20.31■□□□□ 0.84
CCS-208ENST00000533244 TRNAU1APQ9NX07 287 aaKnown RBP20.31■□□□□ 0.84
CCS-208ENST00000533244 NCKIPSDQ9NZQ3 722 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 VPS18Q9P253 973 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 SUFUQ9UMX1 484 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 NEUROG3Q9Y4Z2 214 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 OAS3Q9Y6K5 1087 aaKnown RBP20.31■□□□□ 0.84
CCS-208ENST00000533244 PTPRBP23467 1997 aa20.31■□□□□ 0.84
CCS-208ENST00000533244 INPP4BO15327 924 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 CEP104O60308 925 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 SPINK2P20155 84 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 DAB2P98082 770 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 SMAD1Q15797 465 aaKnown RBP20.3■□□□□ 0.84
CCS-208ENST00000533244 ZNF569Q5MCW4 686 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 ALS2CLQ60I27 953 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 SLC35F3Q8IY50 421 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 SLC35F6Q8N357 371 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 RASGEF1CQ8N431 466 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 GPBAR1Q8TDU6 330 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 TBL1YQ9BQ87 522 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 TRMT1Q9NXH9 659 aaKnown RBP20.3■□□□□ 0.84
CCS-208ENST00000533244 FEZ2Q9UHY8 353 aaPredicted RBP20.3■□□□□ 0.84
CCS-208ENST00000533244 ZNF148Q9UQR1 794 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 TMEM98Q9Y2Y6 226 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 CHD8Q9HCK8 2581 aa20.3■□□□□ 0.84
CCS-208ENST00000533244 USP12O75317 370 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 MYF5P13349 255 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 DUSP3P51452 185 aaPredicted RBP20.29■□□□□ 0.84
CCS-208ENST00000533244 SNX1Q13596 522 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 ZDHHC20Q5W0Z9 365 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 DOK6Q6PKX4 331 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 DHRS13Q6UX07 377 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 TMPRSS7Q7RTY8 843 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 NRROSQ86YC3 692 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 CCL4L1Q8NHW4 92 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 SPATA16Q9BXB7 569 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 LRRC40Q9H9A6 602 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 BPIFA1Q9NP55 256 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 MOSPD1Q9UJG1 213 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 KLK13Q9UKR3 277 aa20.29■□□□□ 0.84
CCS-208ENST00000533244 TTC7AQ9ULT0 858 aaPredicted RBP20.29■□□□□ 0.84
CCS-208ENST00000533244 DRG1Q9Y295 367 aaKnown RBP20.29■□□□□ 0.84
CCS-208ENST00000533244 ZNF106Q9H2Y7 1883 aaKnown RBP20.29■□□□□ 0.84
CCS-208ENST00000533244 EME2A4GXA9 379 aaPredicted RBP20.28■□□□□ 0.84
CCS-208ENST00000533244 USP27XA6NNY8 438 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 PPFIA2O75334 1257 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 AP2A1O95782 977 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 ATP1A1P05023 1023 aaKnown RBP20.28■□□□□ 0.84
CCS-208ENST00000533244 GP1BAP07359 652 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 GNPDA1P46926 289 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 SPARCL1Q14515 664 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 TCEA2Q15560 299 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 TAF1AQ15573 450 aaPredicted RBP20.28■□□□□ 0.84
CCS-208ENST00000533244 LONRF2Q1L5Z9 754 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 SCG3Q8WXD2 468 aaKnown RBP20.28■□□□□ 0.84
CCS-208ENST00000533244 GLMNQ92990 594 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 GLYATL1Q969I3 302 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms