RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 MAVSQ7Z434 540 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 NET1Q7Z628 596 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 TMEM150AQ86TG1 271 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 CUZD1Q86UP6 607 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 BBS7Q8IWZ6 715 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 FAM217AQ8IXS0 508 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 HS6ST3Q8IZP7 471 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 FBXO39Q8N4B4 442 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 POU5F2Q8N7G0 328 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 LEMD2Q8NC56 503 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 PPFIBP2Q8ND30 876 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 RBM15BQ8NDT2 890 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 OR6Y1Q8NGX8 325 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 STAG3L4Q8TBR4 150 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 ADAMTS19Q8TE59 1207 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 PHF21BQ96EK2 531 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 RSRC1Q96IZ7 334 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 CATSPER2Q96P56 530 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 GPR78Q96P69 363 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 SLC22A12Q96S37 553 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 UHRF1Q96T88 793 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 MIPEPQ99797 713 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 TACO1Q9BSH4 297 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 CLPBQ9H078 707 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 C1orf21Q9H246 121 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 TFB2MQ9H5Q4 396 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 SARS2Q9NP81 518 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 TAS2R1Q9NYW7 299 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 STOML1Q9UBI4 398 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 BCAP29Q9UHQ4 241 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 RAPGEFL1Q9UHV5 662 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 CRLS1Q9UJA2 301 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 GNPTGQ9UJJ9 305 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 G3BP2Q9UN86 482 aaKnown RBP10.73□□□□□ -0.69
SPIDR-222ENST00000524006 SLC8A2Q9UPR5 921 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 PCDHB1Q9Y5F3 818 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 SLC4A7Q9Y6M7 1214 aa10.73□□□□□ -0.69
SPIDR-222ENST00000524006 KIAA1549LQ6ZVL6 1849 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 C1orf232A0A0U1RR37 186 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 CCDC189A1A4V9 331 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 GRM6O15303 877 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 BNIP3LO60238 219 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 KERAO60938 352 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 TM7SF2O76062 418 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 CHEK2O96017 543 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PENKP01210 267 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ESR1P03372 595 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 CD1DP15813 335 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PTPN2P17706 415 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 CTPS1P17812 591 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 IMPDH1P20839 514 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PTGER3P43115 390 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 RGS4P49798 205 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 NUDT2P50583 147 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 SUOXP51687 545 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 HERVK_113P63132 956 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 NFKB2Q00653 900 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 LMAN2Q12907 356 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 TUBB3Q13509 450 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 KPNB1Q14974 876 aaKnown RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 HERC3Q15034 1050 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 RCN1Q15293 331 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PPP2R2DQ66LE6 453 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 USP45Q70EL2 814 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 GAREM2Q75VX8 874 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 RTL10Q7L3V2 364 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 TMC8Q8IU68 726 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ULK2Q8IYT8 1036 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PTGR2Q8N8N7 351 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 GIMAP7Q8NHV1 300 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 SH3RF2Q8TEC5 729 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 LPGAT1Q92604 370 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 FAM136AQ96C01 138 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 L3HYPDHQ96EM0 354 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 UBXN10Q96LJ8 280 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ANKRD27Q96NW4 1050 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 GPR21Q99679 349 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ERVK-6Q9BXR3 956 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 DERL2Q9GZP9 239 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 MAGEE1Q9HCI5 957 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 BPIFA1Q9NP55 256 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 MAN1C1Q9NR34 630 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 EVLQ9UI08 416 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 ZMYM5Q9UJ78 669 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 APPL1Q9UKG1 709 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 FAM50BQ9Y247 325 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 LZTS1Q9Y250 596 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
SPIDR-222ENST00000524006 PRRC2BQ5JSZ5 2229 aaKnown RBP10.72□□□□□ -0.69
SPIDR-222ENST00000524006 LCHNA4D1U4 455 aa10.71□□□□□ -0.69
SPIDR-222ENST00000524006 NPEPPSL1A6NEC2 478 aa10.71□□□□□ -0.69
SPIDR-222ENST00000524006 NEMP2A6NFY4 417 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms