RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 REXO1L1PQ8IX06 675 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 NRSN1Q8IZ57 195 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 FAM181AQ8N9Y4 354 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 GATA6Q92908 595 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 COX14Q96I36 57 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 TBATAQ96M53 351 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 ALS2CR12Q96Q35 445 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 GPR63Q9BZJ6 419 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 CARS2Q9HA77 564 aaKnown RBP17.76■□□□□ 0.43
CLK4-211ENST00000522556 PKD2L2Q9NZM6 624 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 SUFUQ9UMX1 484 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 NEUROG3Q9Y4Z2 214 aa17.76■□□□□ 0.43
CLK4-211ENST00000522556 GOLGA6L9A6NEM1 432 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 TNFRSF10CO14798 259 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 TRIM16O95361 564 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 ALPPL2P10696 532 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 AK4P27144 223 aaPredicted RBP17.75■□□□□ 0.43
CLK4-211ENST00000522556 CXCR5P32302 372 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 BLKP51451 505 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 SNX1Q13596 522 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 OASLQ15646 514 aaKnown RBP17.75■□□□□ 0.43
CLK4-211ENST00000522556 PERM1Q5SV97 790 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 ITPRIPL1Q6GPH6 555 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 TMPRSS7Q7RTY8 843 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 NRROSQ86YC3 692 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 GLIS1Q8NBF1 620 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 TTC13Q8NBP0 860 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 BLOC1S5Q8TDH9 187 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 PDLIM2Q96JY6 352 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 DUSP23Q9BVJ7 150 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 FSD1LQ9BXM9 530 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 FAM83DQ9H4H8 585 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 KCTD5Q9NXV2 234 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 TMPRSS11EQ9UL52 423 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 SLC17A4Q9Y2C5 497 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 PRKAB1Q9Y478 270 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 PCDHGA1Q9Y5H4 931 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 CHD8Q9HCK8 2581 aa17.75■□□□□ 0.43
CLK4-211ENST00000522556 C5orf60A6NFR6 353 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 TPP1O14773 563 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 LIASO43766 372 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 ETS1P14921 441 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 KELP23276 732 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 GEMP55040 296 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 ELOCQ15369 112 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 SMAD1Q15797 465 aaKnown RBP17.74■□□□□ 0.43
CLK4-211ENST00000522556 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
CLK4-211ENST00000522556 HES3Q5TGS1 186 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 KLHDC8BQ8IXV7 354 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 FSTL5Q8N475 847 aaPredicted RBP17.74■□□□□ 0.43
CLK4-211ENST00000522556 ATL2Q8NHH9 583 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 IFI44Q8TCB0 444 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 HIC2Q96JB3 615 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 CARD9Q9H257 536 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 RABGEF1Q9UJ41 708 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 KCTD3Q9Y597 815 aa17.74■□□□□ 0.43
CLK4-211ENST00000522556 CPED1A4D0V7 1026 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 MTX2O75431 263 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 EPOP01588 193 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 HLA-DPA1P20036 260 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 INSM1Q01101 510 aaPredicted RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 MSLNQ13421 630 aaPredicted RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 HS1BP3Q53T59 392 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 DENND5AQ6IQ26 1287 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 RANBP10Q6VN20 620 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 EFL1Q7Z2Z2 1120 aaKnown RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 TAF8Q7Z7C8 310 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 NLRP8Q86W28 1048 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 TRIM58Q8NG06 486 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 SPATA16Q9BXB7 569 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 SPATS2LQ9NUQ6 558 aaKnown RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 PIH1D1Q9NWS0 290 aaKnown RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 TRMT1Q9NXH9 659 aaKnown RBP17.73■□□□□ 0.43
CLK4-211ENST00000522556 GULP1Q9UBP9 304 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 DOLKQ9UPQ8 538 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 MSRB2Q9Y3D2 182 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 ARL5AQ9Y689 179 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 CEP295Q9C0D2 2601 aa17.73■□□□□ 0.43
CLK4-211ENST00000522556 FAM221BA6H8Z2 402 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 B4DGG1 531 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 PDE2AO00408 941 aaPredicted RBP17.72■□□□□ 0.43
CLK4-211ENST00000522556 GAPDHSO14556 408 aaPredicted RBP17.72■□□□□ 0.43
CLK4-211ENST00000522556 NRDCO43847 1150 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 NOBOXO60393 691 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 DNAJC6O75061 913 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 ANXA9O76027 345 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 ASMTLO95671 621 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 FGF1P05230 155 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 IVLP07476 585 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 ADCY8P40145 1251 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 DCDC1P59894 354 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 NR0B2Q15466 257 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 KCTD11Q693B1 232 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 CCDC70Q6NSX1 233 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 UNQ6494/PRO21346Q6UXR6 183 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms