RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 KIF28PB7ZC32 967 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 PCDH17O14917 1159 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 ZBTB5O15062 677 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 FIBPO43427 364 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 RPP40O75818 363 aaKnown RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 LDLRP01130 860 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 PTMSP20962 102 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 U2AF2P26368 475 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLK4-207ENST00000520909 CALML3P27482 149 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 KRT2P35908 639 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 STAT2P52630 851 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 HMGCS2P54868 508 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 BACE1P56817 501 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 VGLL4Q14135 290 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 CDC37Q16543 378 aaPredicted RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 QRICH1Q2TAL8 776 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 RINT1Q6NUQ1 792 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 C9orf139Q6ZV77 190 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 FAM160B2Q86V87 743 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 BLIDQ8IZY5 108 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 ENDOVQ8N8Q3 282 aaKnown RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 CCDC148Q8NFR7 591 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 CCDC12Q8WUD4 166 aaPredicted RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLK4-207ENST00000520909 BICD1Q96G01 975 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 TXNDC15Q96J42 360 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 RPAP3Q9H6T3 665 aaPredicted RBP4.23□□□□□ -1.73
CLK4-207ENST00000520909 SH3GLB2Q9NR46 395 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 BARHL2Q9NY43 387 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 FEM1BQ9UK73 627 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 CFAP45Q9UL16 551 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 CNTN6Q9UQ52 1028 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 SSC5DA1L4H1 1573 aa4.23□□□□□ -1.73
CLK4-207ENST00000520909 CCDC194A0A1B0GVG4 234 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 GOLGA6L4A6NEF3 574 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 C19orf81C9J6K1 198 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 WDR46O15213 610 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 PLA2G6O60733 806 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ZBED4O75132 1171 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 FLOT1O75955 427 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 CELF2O95319 508 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 HARSP12081 509 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 PRKCHP24723 683 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 GNA11P29992 359 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ALDH18A1P54886 795 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 RNASELQ05823 741 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 MYBPHQ13203 477 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 STK38Q15208 465 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 USH1GQ495M9 461 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ATL3Q6DD88 541 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 GALNT17Q6IS24 598 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 CCDC174Q6PII3 467 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ERO1BQ86YB8 467 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 NRSN1Q8IZ57 195 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 SPEM1Q8N4L4 309 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ZNF713Q8N859 430 aaPredicted RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 TEX45Q8NA69 505 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 CD101Q93033 1021 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 ZNF566Q969W8 418 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 USP28Q96RU2 1077 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 SLF1Q9BQI6 1058 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 FTOQ9C0B1 505 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLK4-207ENST00000520909 PSTPIP2Q9H939 334 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 C6orf50Q9HD87 102 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 SEL1LQ9UBV2 794 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 NOL7Q9UMY1 257 aaKnown RBP4.22□□□□□ -1.73
CLK4-207ENST00000520909 CLIC4Q9Y696 253 aa4.22□□□□□ -1.73
CLK4-207ENST00000520909 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 ESYT2A0FGR8 921 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 TMEM247A6NEH6 219 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 TULP2O00295 520 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 CXCL11O14625 94 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 HNRNPDLO14979 420 aaKnown RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 MMP3P08254 477 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 MARCKSP29966 332 aaPredicted RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 MXI1P50539 228 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 MRPL12P52815 198 aaKnown RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 UBE2HP62256 183 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 DLG1Q12959 904 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 PPIL2Q13356 520 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 MYBPC2Q14324 1141 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 COG2Q14746 738 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 UBE2SQ16763 222 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 ZACNQ401N2 412 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 RILPL1Q5EBL4 403 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 JAKMIP3Q5VZ66 844 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 ANO1Q5XXA6 986 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 SMIM29Q86T20 159 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 BRI3BPQ8WY22 251 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 OPTNQ96CV9 577 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 C12orf42Q96LP6 360 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 PGLYRP2Q96PD5 576 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 ZMYND12Q9H0C1 365 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 GLT8D2Q9H1C3 349 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 RANBP17Q9H2T7 1088 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms