RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PI3P19957 117 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 TBXAS1P24557 533 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CCR1P32246 355 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 EIF4A3P38919 411 aaKnown RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 ACADSBP45954 432 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RECQLP46063 649 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 PEX5P50542 639 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 HK3P52790 923 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 YWHAEP62258 255 aaKnown RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 KRT83P78385 493 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 NUCB2P80303 420 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 B4GALNT1Q00973 533 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 PPARDQ03181 441 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 PTK2BQ14289 1009 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 ALG11Q2TAA5 492 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 DENND1BQ6P3S1 775 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 LINGO4Q6UY18 593 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SPRED1Q7Z699 444 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SETD3Q86TU7 594 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RELL1Q8IUW5 271 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SFTPA2Q8IWL1 248 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 LMNTD2Q8IXW0 634 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CEP57L1Q8IYX8 460 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 WDTC1Q8N5D0 677 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 DCAF4L2Q8NA75 395 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 ATP11CQ8NB49 1132 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 TP53I13Q8NBR0 393 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 PCDH19Q8TAB3 1148 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 GRIN3AQ8TCU5 1115 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 KAT5Q92993 513 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 FUBP1Q96AE4 644 aaKnown RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RAB7BQ96AH8 199 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CCDC114Q96M63 670 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF396Q96N95 335 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RPRD1AQ96P16 312 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 MIPEPQ99797 713 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 HEPHQ9BQS7 1158 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 TRIM62Q9BVG3 475 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 CPEB1Q9BZB8 566 aaKnown RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 EDEM3Q9BZQ6 932 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SLC13A1Q9BZW2 595 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 DYRK4Q9NR20 520 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 USP25Q9UHP3 1055 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 SLC12A6Q9UHW9 1150 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 IPO11Q9UI26 975 aaKnown RBP6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RCOR1Q9UKL0 485 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 VANGL2Q9ULK5 521 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 RNF215Q9Y6U7 377 aa6.06□□□□□ -1.44
PABPC1-207ENST00000518716 PABPN1LA6NDY0 278 aaKnown RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 E5RJQ4 531 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 STMND1H3BQB6 276 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 B4GAT1O43505 415 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 COQ9O75208 318 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 KRT38O76015 456 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CBX7O95931 251 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 FGF3P11487 239 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 LIFP15018 202 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 POU3F2P20265 443 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 NME2P22392 152 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 UGT1A3P35503 534 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 SERPINH1P50454 418 aaKnown RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CCNHP51946 323 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ARF5P84085 180 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 SGCGQ13326 291 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 SQSTM1Q13501 440 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 HLTFQ14527 1009 aaKnown RBP eCLIP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 NR1D2Q14995 579 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF805Q5CZA5 627 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CARD16Q5EG05 197 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 FAXCQ5TGI0 409 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 KRT77Q7Z794 578 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 TICAM1Q8IUC6 712 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 DEFB106AQ8N104 65 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 PCDH20Q8N6Y1 951 aaKnown RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 PAF1Q8N7H5 531 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 SPATA20Q8TB22 786 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 NT5C3BQ969T7 300 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ISG20Q96AZ6 181 aaKnown RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 DACT3Q96B18 629 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 PPP1R16AQ96I34 528 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 SLC45A3Q96JT2 553 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 C1orf74Q96LT6 269 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 KREMEN1Q96MU8 473 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CATSPER2Q96P56 530 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 MED15Q96RN5 788 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 RBM15Q96T37 977 aaKnown RBP eCLIP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CMKLR1Q99788 373 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 METTL5Q9NRN9 209 aaKnown RBP6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ASNSD1Q9NWL6 643 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ARHGEF38Q9NXL2 777 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 GULP1Q9UBP9 304 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ACAD8Q9UKU7 415 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 GPR34Q9UPC5 381 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ITM2BQ9Y287 266 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 PAXBP1Q9Y5B6 917 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 PCDHB4Q9Y5E5 795 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 ACTL7AQ9Y615 435 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 DGKBQ9Y6T7 804 aa6.05□□□□□ -1.44
PABPC1-207ENST00000518716 CRYBG3Q68DQ2 2970 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms