RNA–Protein interactions for RNA: ENST00000516384.1

SCARNA15.1-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 125 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.1-201ENST00000516384 MARCH4Q9P2E8 410 aaPredicted RBP2.07□□□□□ -2.08
SCARNA15.1-201ENST00000516384 THRAP3Q9Y2W1 955 aaKnown RBP2.07□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PCDHGB2Q9Y5G2 931 aa2.07□□□□□ -2.08
SCARNA15.1-201ENST00000516384 A0A087WW49 117 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 FAM90A20PA6NIJ5 464 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 EIF3DO15371 548 aaKnown RBP eCLIP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ACTL6BO94805 426 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TNFRSF6BO95407 300 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 DUS4LO95620 317 aaKnown RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ITGA2BP08514 1039 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 CSF1P09603 554 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 CEBPBP17676 345 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 DRD3P35462 400 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 HNF1BP35680 557 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ARCN1P48444 511 aaKnown RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 YWHAZP63104 245 aaKnown RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 RFTN1Q14699 578 aaPredicted RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SLC18A3Q16572 532 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ODR4Q5SWX8 454 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 IZUMO3Q5VZ72 239 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TMEM64Q6YI46 380 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 Q6ZSR9 355 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PLEKHM3Q6ZWE6 761 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SLC44A2Q8IWA5 706 aaPredicted RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 KIAA1191Q96A73 305 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TRAPPC9Q96Q05 1148 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SH3GL2Q99962 352 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 LAT2Q9GZY6 243 aa2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TTC7AQ9ULT0 858 aaPredicted RBP2.06□□□□□ -2.08
SCARNA15.1-201ENST00000516384 MAGEB17A8MXT2 336 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PLOD2O00469 737 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TNPO2O14787 897 aaKnown RBP2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ACADMP11310 421 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ETFAP13804 333 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 MSH3P20585 1137 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 AP2B1P63010 937 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ELAVL2Q12926 359 aaKnown RBP2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ALS2CLQ60I27 953 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SEL1L3Q68CR1 1132 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TBC1D1Q86TI0 1168 aaPredicted RBP2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 KIAA2013Q8IYS2 634 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SCAMP5Q8TAC9 235 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 FAM71BQ8TC56 605 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SLC38A5Q8WUX1 472 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 FBXL8Q96CD0 374 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TIFAQ96CG3 184 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PRAC1Q96KF2 57 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 KCNN2Q9H2S1 579 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 DDX4Q9NQI0 724 aaKnown RBP2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 NYAP2Q9P242 653 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 LRWD1Q9UFC0 647 aa2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 LIMA1Q9UHB6 759 aaKnown RBP2.05□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PHOX2AO14813 284 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TRMUO75648 421 aaKnown RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PDE9AO76083 593 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 NADKO95544 446 aaPredicted RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TNNT1P13805 278 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SLC2A4P14672 509 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 MAOAP21397 527 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 UGT1A4P22310 534 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 UBA1P22314 1058 aaKnown RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 WNT5AP41221 380 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 HNF4AP41235 474 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 BLKP51451 505 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SLC45A4Q5BKX6 768 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ARHGEF16Q5VV41 709 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 MOB3CQ70IA8 216 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PIWIL4Q7Z3Z4 852 aaKnown RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 CCDC117Q8IWD4 279 aaPredicted RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 BEST2Q8NFU1 509 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SIN3AQ96ST3 1273 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 VEZTQ9HBM0 779 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TLR8Q9NR97 1041 aaKnown RBP2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 CARD8Q9Y2G2 431 aa2.04□□□□□ -2.08
SCARNA15.1-201ENST00000516384 FLT1P17948 1338 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SH2D7A6NKC9 451 aaPredicted RBP2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 IGHV3-13P01766 116 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 METAP2P50579 478 aaKnown RBP eCLIP2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ACVR2BQ13705 512 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SPARCL1Q14515 664 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 DCST1Q5T197 706 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 METTL2BQ6P1Q9 378 aaKnown RBP2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 DUS1LQ6P1R4 473 aaKnown RBP2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 BRAT1Q6PJG6 821 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 RRAGAQ7L523 313 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 SYT13Q7L8C5 426 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 NOXA1Q86UR1 476 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 KCNMB4Q86W47 210 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 PARP8Q8N3A8 854 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 GPATCH3Q96I76 525 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 METTL2AQ96IZ6 378 aaKnown RBP2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 TWNKQ96RR1 684 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 MMP25Q9NPA2 562 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 ANAPC11Q9NYG5 84 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 FAM50BQ9Y247 325 aa2.03□□□□□ -2.08
SCARNA15.1-201ENST00000516384 IGHV4-4A0A075B6R2 117 aa2.02□□□□□ -2.09
SCARNA15.1-201ENST00000516384 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.02□□□□□ -2.09
SCARNA15.1-201ENST00000516384 TMEM202A6NGA9 273 aa2.02□□□□□ -2.09
SCARNA15.1-201ENST00000516384 KPNA7A9QM74 516 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms