RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 APBB2Q92870 758 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 NEUROG1Q92886 237 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 GAD1Q99259 594 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 IL25Q9H293 177 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 OCIAD1Q9NX40 245 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 C1RLQ9NZP8 487 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 ACSL5Q9ULC5 683 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 PADI3Q9ULW8 664 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 SNX9Q9Y5X1 595 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 ATXN2Q99700 1313 aaKnown RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 A0A1W2PR77 199 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 M0QZ24 198 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 SRPRAP08240 638 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 PLA2G2AP14555 144 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 TMEM11P17152 192 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 ANXA7P20073 488 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 UBA1P22314 1058 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 PON1P27169 355 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 BDKRB2P30411 391 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 GCH1P30793 250 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 HOXA13P31271 388 aaPredicted RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CDKN2AP42771 156 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 SNX16P57768 344 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CSNK2A1P68400 391 aaPredicted RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 TFAP4Q01664 338 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 GRSF1Q12849 480 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 GRIK2Q13002 908 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 OASLQ15646 514 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CTF1Q16619 201 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 PNLIPRP3Q17RR3 467 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 ATP13A5Q4VNC0 1218 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 ZNF805Q5CZA5 627 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CRELD2Q6UXH1 353 aaPredicted RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 NRROSQ86YC3 692 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 TEX11Q8IYF3 940 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CSNK2A3Q8NEV1 391 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 SPATA22Q8NHS9 363 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 ELP5Q8TE02 316 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 WFIKKN2Q8TEU8 576 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 ORAI1Q96D31 301 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 SCMH1Q96GD3 660 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CALML4Q96GE6 196 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 PCYT2Q99447 389 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 NCAPGQ9BPX3 1015 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 NTPCRQ9BSD7 190 aaKnown RBP5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 CENPOQ9BU64 300 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 MXD3Q9BW11 206 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 PAG1Q9NWQ8 432 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 OR14J1Q9UGF5 321 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 FBXW11Q9UKB1 542 aa5.12□□□□□ -1.59
HMGCS1-207ENST00000514610 OGG1O15527 345 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 DAB1O75553 588 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 TSPAN9O75954 239 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 PRSS2P07478 247 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 NGFRP08138 427 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 SELLP14151 372 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 APOBEC1P41238 236 aaKnown RBP5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 PRCPP42785 496 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 THBS3P49746 956 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 FOXG1P55316 489 aaPredicted RBP5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 EGR4Q05215 589 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 LTBQ06643 244 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 EPS8Q12929 822 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 CDC16Q13042 620 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 MYBPHQ13203 477 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 FRG2Q64ET8 278 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 ENOSF1Q7L5Y1 443 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 IQCF1Q8N6M8 205 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 SMRP1Q8NCR6 262 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 TRPC4APQ8TEL6 797 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 FIZ1Q96SL8 496 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 MAK16Q9BXY0 300 aaKnown RBP5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 SEZ6LQ9BYH1 1024 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 CMAHPQ9Y471 501 aa5.11□□□□□ -1.59
HMGCS1-207ENST00000514610 ENTPD3O75355 529 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE7O76087 117 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 KDM4BO94953 1096 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 CLDN14O95500 239 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 AFPP02771 609 aaKnown RBP5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE12FP0CL80 117 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE12GP0CL81 117 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE12IP0CL82 117 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 SRCP12931 536 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GPR143P51810 404 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 SPOCK1Q08629 439 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 SREBF2Q12772 1141 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE1Q13065 139 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 GAGE4Q13068 117 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 DECR1Q16698 335 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 NSUN5P2Q63ZY6 315 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 LCN10Q6JVE6 187 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 RHBDF2Q6PJF5 856 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 ATG9AQ7Z3C6 839 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 ZNF34Q8IZ26 560 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 ACVR1CQ8NER5 493 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 OR1J2Q8NGS2 313 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 CMKLR1Q99788 373 aa5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 NUDT16L1Q9BRJ7 211 aaKnown RBP5.1□□□□□ -1.59
HMGCS1-207ENST00000514610 WACQ9BTA9 647 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms