RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ADGRA3Q8IWK6 1321 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SCN4AP35499 1836 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NID2Q14112 1375 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MYH7BA7E2Y1 1941 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 MYH13Q9UKX3 1938 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 DICER1Q9UPY3 1922 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 KLF18A0A0U1RQI7 1052 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TMEM233B4DJY2 109 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 EIF3FO00303 357 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 BTN3A1O00481 513 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GYG2O15488 501 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TRMUO75648 421 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 KRT75O95678 551 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 A1BGP04217 495 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SERPING1P05155 500 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 KITP10721 976 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 UQCRBP14927 111 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 PHKG2P15735 406 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CDH3P22223 829 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CCNCP24863 283 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 HTR1BP28222 390 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 HOXD9P28356 352 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 HOXD10P28358 340 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TKTP29401 623 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GKP32189 559 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CHRNA3P32297 505 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SERPINB6P35237 376 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 METAP2P50579 478 aaKnown RBP eCLIP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 RAP1GDS1P52306 607 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 HNRNPFP52597 415 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ATP6V0D1P61421 351 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ESRRGP62508 458 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 DR1Q01658 176 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GHRHRQ02643 423 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 PLOD1Q02809 727 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CYP4A11Q02928 519 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 DMPKQ09013 629 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 STK4Q13043 487 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 RAPGEF1Q13905 1077 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GIT2Q14161 759 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SPARCL1Q14515 664 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 RBMS2Q15434 407 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 UAP1Q16222 522 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 PTCHD3Q3KNS1 767 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF829Q3KNS6 432 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ANKRD20A4Q4UJ75 823 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 AWAT1Q58HT5 328 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CYP4A22Q5TCH4 519 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 KLHDC7AQ5VTJ3 777 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 LINC00299Q6ZSB3 139 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ANO5Q75V66 913 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 UBE2Q1Q7Z7E8 422 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SFTPA1Q8IWL2 248 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SAMD14Q8IZD0 417 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GPC2Q8N158 579 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 RASGEF1CQ8N431 466 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 KIF2BQ8N4N8 673 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SPERTQ8NA61 448 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 BBOF1Q8ND07 529 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CEP70Q8NHQ1 597 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 AFG1LQ8WV93 481 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GIMAP1Q8WWP7 306 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ATL1Q8WXF7 558 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIM63Q969Q1 353 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 COQ8BQ96D53 544 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ERP27Q96DN0 273 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 PAGE5Q96GU1 130 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 NSMCE3Q96MG7 304 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TCEANC2Q96MN5 208 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TUBGCP2Q9BSJ2 902 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TXLNGYQ9BZA5 131 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CRNKL1Q9BZJ0 848 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 EBF3Q9H4W6 596 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 C17orf75Q9HAS0 396 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CNGB3Q9NQW8 809 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ETNK2Q9NVF9 386 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ARMC1Q9NVT9 282 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ARHGEF38Q9NXL2 777 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TAB2Q9NYJ8 693 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 C9orf78Q9NZ63 289 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 SEL1LQ9UBV2 794 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 ZMAT5Q9UDW3 170 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 CNOT8Q9UFF9 292 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 GNPTGQ9UJJ9 305 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 FBXO9Q9UK97 447 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 STX8Q9UNK0 236 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TRAF3IP3Q9Y228 551 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIM17Q9Y577 477 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 LAMA4Q16363 1823 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 THSD7BQ9C0I4 1608 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 COL15A1P39059 1388 aa4.64□□□□□ -1.67
PDLIM5-211ENST00000508531 DDX60Q8IY21 1712 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 SLX4Q8IY92 1834 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CCDC160A6NGH7 325 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MYMKA6NI61 221 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM25EA8MYX2 175 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 BTBD18B2RXH4 712 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PSMD9O00233 223 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 KPNA4O00629 521 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PFDN6O15212 129 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms