RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ECHDC3Q96DC8 303 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SMAD5Q99717 465 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 SLC25A23Q9BV35 468 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 TM6SF2Q9BZW4 377 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RAB6CQ9H0N0 254 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SARS2Q9NP81 518 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 PCDH12Q9NPG4 1184 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.99□□□□□ -1.45
GYPB-204ENST00000504951 SEMA5BQ9P283 1151 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 ATP8A1Q9Y2Q0 1164 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 KLF2Q9Y5W3 355 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 ST14Q9Y5Y6 855 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 OAS3Q9Y6K5 1087 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 CSMD2Q7Z408 3487 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 A0A1W2PQ67 120 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 BICDL2A1A5D9 508 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 FOXN3O00409 490 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 MSTNO14793 375 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 KLHL41O60662 606 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 GNA14O95837 355 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 GM2AP17900 193 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ITIH2P19823 946 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 XPAP23025 273 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 CDH5P33151 784 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 ACVRL1P37023 503 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ITGA1P56199 1179 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 PER3P56645 1201 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 RNASE9P60153 205 aaKnown RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 CTBSQ01459 385 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 DEUP1Q05D60 604 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 DPTQ07507 201 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 NSUN2Q08J23 767 aaKnown RBP eCLIP5.98□□□□□ -1.45
GYPB-204ENST00000504951 PAK1Q13153 545 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ART3Q13508 389 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 LRP8Q14114 963 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ERV3-1Q14264 604 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ZRSR2Q15696 482 aaKnown RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 ZXDCQ2QGD7 858 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
GYPB-204ENST00000504951 ATP1A1-AS1Q5TC04 95 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 NKAIN2Q5VXU1 208 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ZNF517Q6ZMY9 492 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 SYVN1Q86TM6 617 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 PLXDC1Q8IUK5 500 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 CREBRFQ8IUR6 639 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 MCEMP1Q8IX19 187 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 ELOA2Q8IYF1 753 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 GLIS1Q8NBF1 620 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 PLA2G15Q8NCC3 412 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 HDAC11Q96DB2 347 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 COQ10AQ96MF6 247 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 TBCBQ99426 244 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 SLC38A3Q99624 504 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 WRAP53Q9BUR4 548 aaKnown RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 LGR4Q9BXB1 951 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 MAGEB5Q9BZ81 275 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 BRD8Q9H0E9 1235 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 WDR26Q9H7D7 661 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 APMAPQ9HDC9 416 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 SLAMF7Q9NQ25 335 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 PHPT1Q9NRX4 125 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 TMEM9Q9P0T7 183 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 APEX2Q9UBZ4 518 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 CROTQ9UKG9 612 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 COQ6Q9Y2Z9 468 aa5.98□□□□□ -1.45
GYPB-204ENST00000504951 MRPS18BQ9Y676 258 aaKnown RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 ZNF106Q9H2Y7 1883 aaKnown RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 MN1Q10571 1320 aaPredicted RBP5.98□□□□□ -1.45
GYPB-204ENST00000504951 CELSR1Q9NYQ6 3014 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 SVILO95425 2214 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 DIDO1Q9BTC0 2240 aaKnown RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 PIPSLA2A3N6 862 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ANKUB1A6NFN9 424 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 LILRA5A6NI73 299 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 OR5K4A6NMS3 321 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 WASH4PA8MWX3 477 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 PSMD11O00231 422 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 RAMP2O60895 175 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 SRGAP2O75044 1071 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 TMCC1O94876 653 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 PCCBP05166 539 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 PRKCSHP14314 528 aaPredicted RBP5.97□□□□□ -1.45
GYPB-204ENST00000504951 CAPN3P20807 821 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 PTPN4P29074 926 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ADRA1BP35368 520 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 FLT3P36888 993 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ADCY8P40145 1251 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 PPP1R2P41236 205 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 SULT1E1P49888 294 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 CLCNKAP51800 687 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 RALGDSQ12967 914 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 BIRC2Q13490 618 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 DNASE1L3Q13609 305 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 ZNF235Q14590 738 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 SLC6A19Q695T7 634 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 GBP6Q6ZN66 633 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 DPPA4Q7L190 304 aa5.97□□□□□ -1.45
GYPB-204ENST00000504951 TP53INP2Q8IXH6 220 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms