RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 HCRTR2O43614 444 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 AHCYL1O43865 530 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZIC3O60481 467 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMCC2O75069 709 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 GJB3O75712 270 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 TSPAN9O75954 239 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 FTCDO95954 541 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 RB1P06400 928 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CSH1P0DML2 217 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CSH2P0DML3 217 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PORP16435 677 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMEM11P17152 192 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 HOXD3P31249 432 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 HNRNPH1P31943 449 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACTN2P35609 894 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PSMB10P40306 273 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 MXI1P50539 228 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 METAP2P50579 478 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 RRP1P56182 461 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ABATP80404 500 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CHAF1BQ13112 559 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 AIMP2Q13155 320 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACVR2BQ13705 512 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 IRF3Q14653 427 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SF3B4Q15427 424 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 KRT24Q2M2I5 525 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 EIF2S3LQ2VIR3 472 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ALDH1L2Q3SY69 923 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CDONQ4KMG0 1287 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 KIAA0930Q6ICG6 404 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 JADE1Q6IE81 842 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLEKHA7Q6IQ23 1121 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 METTL2BQ6P1Q9 378 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PQLC2Q6ZP29 291 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CLEC17AQ6ZS10 378 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SZRD1Q7Z422 152 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZC3HC1Q86WB0 502 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 DSELQ8IZU8 1212 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR8H2Q8N162 312 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SPATA6LQ8N4H0 392 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PRR26Q8N8Z3 221 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 NEXN-AS1Q8NBZ9 246 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 OIT3Q8WWZ8 545 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ADAMTS14Q8WXS8 1223 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SGCDQ92629 289 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 IGSF8Q969P0 613 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 MIB2Q96AX9 1013 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 RRNAD1Q96FB5 475 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ELMOD3Q96FG2 381 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 CALML4Q96GE6 196 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 METTL2AQ96IZ6 378 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 TXNDC15Q96J42 360 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PPP1R13BQ96KQ4 1090 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 LRFN5Q96NI6 719 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACOX2Q99424 681 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PCGF1Q9BSM1 259 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SF3B5Q9BWJ5 86 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 MAK16Q9BXY0 300 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 DCLK3Q9C098 648 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNN2Q9H2S1 579 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ESRP2Q9H6T0 727 aaKnown RBP2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PPP1R3EQ9H7J1 279 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 FBXL17Q9UF56 701 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 ICAM5Q9UMF0 924 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 PCDHGB4Q9UN71 923 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 A0A1W2PQ09 198 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 H3BQ06 376 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 WNT9BO14905 357 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 HS6ST1O60243 411 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 JRKO75564 520 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 CH25HO95992 272 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 GABRB1P18505 474 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 MAOAP21397 527 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 C21orf33P30042 268 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 GCH1P30793 250 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 HOXA11P31270 313 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 STX2P32856 288 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACSL1P33121 698 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 AMTP48728 403 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 PCYT1AP49585 367 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 CAMPP49913 170 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TERF1P54274 439 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SNX16P57768 344 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TFAP4Q01664 338 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 IKQ13123 557 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 EFNB3Q15768 340 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 ADIPOQQ15848 244 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 ASTE1Q2TB18 679 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TDRD12Q587J7 1177 aaKnown RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLEKHS1Q5SXH7 462 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 OTUD3Q5T2D3 398 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 LRIF1Q5T3J3 769 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 GGNBP1Q5YKI7 109 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SIGIRRQ6IA17 410 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 NADSYN1Q6IA69 706 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 C16orf54Q6UWD8 224 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEPT14Q6ZU15 432 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 DPPA4Q7L190 304 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TAOK1Q7L7X3 1001 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms