RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ZFYVE1Q9HBF4 777 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 FAM153AQ9UHL3 310 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 RABGEF1Q9UJ41 708 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 PCDHB1Q9Y5F3 818 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 SPO11Q9Y5K1 396 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 ST14Q9Y5Y6 855 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 ANKRD11Q6UB99 2663 aaPredicted RBP24.55■■□□□ 1.52
UPF3A-209ENST00000492270 APC2O95996 2303 aa24.55■■□□□ 1.52
UPF3A-209ENST00000492270 FADS2P1A8MWK0 482 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 DDX3YO15523 660 aaKnown RBP24.54■■□□□ 1.52
UPF3A-209ENST00000492270 AK4P27144 223 aaPredicted RBP24.54■■□□□ 1.52
UPF3A-209ENST00000492270 RAVER1Q8IY67 606 aaKnown RBP24.54■■□□□ 1.52
UPF3A-209ENST00000492270 SYCE1Q8N0S2 351 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 CACTIN-AS1Q8N1I8 211 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 NAT6Q93015 286 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 COX14Q96I36 57 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 HIC2Q96JB3 615 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 FCRL5Q96RD9 977 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 VAT1Q99536 393 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 CCDC3Q9BQI4 270 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 FAM83DQ9H4H8 585 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 PLEKHM1Q9Y4G2 1056 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 ADGRG1Q9Y653 693 aa24.54■■□□□ 1.52
UPF3A-209ENST00000492270 ACACAQ13085 2346 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 B4DGG1 531 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 AURKAO14965 403 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 NOBOXO60393 691 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 IVLP07476 585 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 WNT3AP56704 352 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 GSDMDP57764 484 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 EIF3EP60228 445 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 ALS2CLQ60I27 953 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 MARK2Q7KZI7 788 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 GPR26Q8NDV2 337 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 GPR156Q8NFN8 814 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 GPBAR1Q8TDU6 330 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 CCDC74AQ96AQ1 378 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 MRGPRX2Q96LB1 330 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 GORASP1Q9BQQ3 440 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 MAGEE1Q9HCI5 957 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 SPATS2LQ9NUQ6 558 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 RSPH14Q9UHP6 348 aa24.53■■□□□ 1.52
UPF3A-209ENST00000492270 CNOT6Q9ULM6 557 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 OAS3Q9Y6K5 1087 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 ZNF106Q9H2Y7 1883 aaKnown RBP24.53■■□□□ 1.52
UPF3A-209ENST00000492270 LOC285095A0A1B0GVY8 99 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 ATP1A1P05023 1023 aaKnown RBP24.52■■□□□ 1.52
UPF3A-209ENST00000492270 PYGLP06737 847 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 RBP3P10745 1247 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 CHRNA4P43681 627 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 TMC3Q7Z5M5 1100 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 NXPE2Q96DL1 559 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 SCARF2Q96GP6 870 aaPredicted RBP24.52■■□□□ 1.52
UPF3A-209ENST00000492270 DEPDC7Q96QD5 511 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 GPR63Q9BZJ6 419 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 DPEP2Q9H4A9 486 aa24.52■■□□□ 1.52
UPF3A-209ENST00000492270 TRNAU1APQ9NX07 287 aaKnown RBP24.52■■□□□ 1.52
UPF3A-209ENST00000492270 PCYT1BQ9Y5K3 369 aaPredicted RBP24.52■■□□□ 1.52
UPF3A-209ENST00000492270 UNC13CQ8NB66 2214 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 PKD1L2Q7Z442 2459 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CELSR3Q9NYQ7 3312 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 MIF4GDA9UHW6 222 aaKnown RBP24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CSO75390 466 aaKnown RBP24.51■■□□□ 1.51
UPF3A-209ENST00000492270 ADCY8P40145 1251 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CETN2P41208 172 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CTBSQ01459 385 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 ILF3Q12906 894 aaKnown RBP eCLIP24.51■■□□□ 1.51
UPF3A-209ENST00000492270 SIRPB2Q5JXA9 342 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CCDC70Q6NSX1 233 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 OGFOD3Q6PK18 319 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 SLC30A9Q6PML9 568 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 CDKL3Q8IVW4 592 aaPredicted RBP24.51■■□□□ 1.51
UPF3A-209ENST00000492270 SLC25A41Q8N5S1 370 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 UBL4BQ8N7F7 174 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 IPMKQ8NFU5 416 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 GSDMCQ9BYG8 508 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 SYNDIG1Q9H7V2 258 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 DKK4Q9UBT3 224 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 TRHDEQ9UKU6 1024 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 GPSM3Q9Y4H4 160 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 BPTFQ12830 3046 aa24.51■■□□□ 1.51
UPF3A-209ENST00000492270 RGSL1A5PLK6 1076 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 TJP3O95049 919 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 ASMTLO95671 621 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 HES6Q96HZ4 224 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 OR2M4Q96R27 311 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 NRSN2Q9GZP1 204 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 GBA3Q9H227 469 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 ARFGAP3Q9NP61 516 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 TAAR2Q9P1P5 351 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 GUCA1BQ9UMX6 200 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 RAXQ9Y2V3 346 aa24.5■■□□□ 1.51
UPF3A-209ENST00000492270 DSPP15924 2871 aaKnown RBP24.49■■□□□ 1.51
UPF3A-209ENST00000492270 KCNN4O15554 427 aa24.49■■□□□ 1.51
UPF3A-209ENST00000492270 MPP3Q13368 585 aa24.49■■□□□ 1.51
UPF3A-209ENST00000492270 RTP5Q14D33 572 aa24.49■■□□□ 1.51
UPF3A-209ENST00000492270 C14orf28Q4W4Y0 310 aa24.49■■□□□ 1.51
UPF3A-209ENST00000492270 PYCR3Q53H96 274 aa24.49■■□□□ 1.51
UPF3A-209ENST00000492270 DARS2Q6PI48 645 aaKnown RBP24.49■■□□□ 1.51
UPF3A-209ENST00000492270 SPATA16Q9BXB7 569 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms