RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TBC1D3IA0A087WXS9 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3EA0A087X179 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3KA0A087X1G2 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 WDR91A4D1P6 747 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 CFAP69A5D8W1 941 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3FA6NER0 549 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3LB9A6J9 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SMAPO00193 183 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 WNT9AO14904 365 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TGDSO95455 350 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 POP4O95707 220 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 UGT2B4P06133 528 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3HP0C7X1 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 ARFIP2P53365 341 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 GPX6P59796 221 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SARNPP82979 210 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 GBE1Q04446 702 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 KHDC1Q4VXA5 237 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 WDR45BQ5MNZ6 344 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SYCP2LQ5T4T6 812 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3GQ6DHY5 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3CQ6IPX1 549 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TMEM154Q6P9G4 183 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SLC30A9Q6PML9 568 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 ERN2Q76MJ5 926 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PARS2Q7L3T8 475 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 ANKMY2Q8IV38 441 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3Q8IZP1 549 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 ARHGAP24Q8N264 748 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PGBD5Q8N414 524 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PLD5Q8N7P1 536 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PPFIBP2Q8ND30 876 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 STMN2Q93045 179 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 NSL1Q96IY1 281 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 KLHL32Q96NJ5 620 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TSSK1BQ9BXA7 367 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 HDAC8Q9BY41 377 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 CADM1Q9BY67 442 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PCED1AQ9H1Q7 454 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 MMADHCQ9H3L0 296 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 CAPN10Q9HC96 672 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 NMRK1Q9NWW6 199 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 HEY2Q9UBP5 337 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PTPRZ1P23471 2315 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 EIF4E1BA6NMX2 242 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 GOLGA8MH3BSY2 632 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 GSC2O15499 205 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SLC7A4O43246 635 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SPINT1O43278 529 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 DNAJC6O75061 913 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SMIM24O75264 130 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PIGNO95427 931 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 IGSF6O95976 241 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 ITGB7P26010 798 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SSTR1P30872 391 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SESN3P58005 492 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 BNC1Q01954 994 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 OCRLQ01968 901 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SFSWAPQ12872 951 aaKnown RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 RCN1Q15293 331 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 DUOXA1Q1HG43 343 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 AASDHQ4L235 1098 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 MAP7D3Q8IWC1 876 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 PALM2Q8IXS6 379 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 BANPQ8N9N5 519 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 SLC35B2Q8TB61 432 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 RMDN1Q96DB5 314 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 DHRS4Q9BTZ2 278 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 FRMD8P1Q9BZ68 369 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-219ENST00000491747 IQANK1A0A1B0GTG1 560 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 LRRC72A6NJI9 287 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 C16orf96A6NNT2 1141 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CFIP05156 583 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SERPINF2P08697 491 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ADRB3P13945 408 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 TSHRP16473 764 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 MAT2AP31153 395 aaKnown RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SERPINB6P35237 376 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CDKN2BP42772 138 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 CDK16Q00536 496 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 GALNT2Q10471 571 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 OVGP1Q12889 678 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF805Q5CZA5 627 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 LRRC73Q5JTD7 316 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 SLC9A4Q6AI14 798 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 LAYNQ6UX15 382 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 GDPD4Q6W3E5 623 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 PDIK1LQ8N165 341 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 OR2I1PQ8NGU4 316 aa9.41□□□□□ -0.9
BRCA1-219ENST00000491747 RFWD2Q8NHY2 731 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms