RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 LRIG2O94898 1065 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 GLRBP48167 497 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 KRTAP10-9P60411 292 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 MIIPQ5JXC2 388 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 FAM102AQ5T9C2 384 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 FAM69BQ5VUD6 431 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 RAET1GQ6H3X3 334 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 FJX1Q86VR8 437 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 ADAMTS17Q8TE56 1095 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 SH3KBP1Q96B97 665 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 TUBGCP5Q96RT8 1024 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 TRIM8Q9BZR9 551 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 STN1Q9H668 368 aaKnown RBP13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 B4GALT6Q9UBX8 382 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 HPSEQ9Y251 543 aa13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 FARSAQ9Y285 508 aaKnown RBP13.56□□□□□ -0.24
EXOSC3-207ENST00000490516 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 P4HA2O15460 535 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 RASSF9O75901 435 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 TYRP1P17643 537 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 SERPINA4P29622 427 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 ETV3P41162 512 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 SNX16P57768 344 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 NRG1Q02297 640 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 CNGA3Q16281 694 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 PWWP2BQ6NUJ5 590 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 TRIM74Q86UV6 250 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 KCNMB4Q86W47 210 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 ZDHHC17Q8IUH5 632 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 GLIS1Q8NBF1 620 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 TBC1D31Q96DN5 1066 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 ATP13A3Q9H7F0 1226 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 TBC1D29Q9UFV1 150 aa13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-207ENST00000490516 NADKO95544 446 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 COX6B1P14854 86 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 ADRA1BP35368 520 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 ATP11AP98196 1134 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 ART3Q13508 389 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 HGSNATQ68CP4 663 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 HSD11B1LQ7Z5J1 315 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 SRLQ86TD4 932 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 ZNF295-AS1Q8N0V1 137 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 CBARPQ8N350 705 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 DTD2Q96FN9 168 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 TMEM51Q9NW97 253 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 C5AR2Q9P296 337 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 UBA2Q9UBT2 640 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
EXOSC3-207ENST00000490516 E2F3O00716 465 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 CMA1P23946 247 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 SYKP43405 635 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 NDUFA8P51970 172 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 LRP8Q14114 963 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 KYNUQ16719 465 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 VWA5B1Q5TIE3 1220 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 Q6ZVL8 140 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 CDH24Q86UP0 819 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 GALNT13Q8IUC8 556 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 AGPAT4Q9NRZ5 378 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 KCNK6Q9Y257 313 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 PCDHGA10Q9Y5H3 936 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 KLF2Q9Y5W3 355 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
EXOSC3-207ENST00000490516 LILRA5A6NI73 299 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 GOLGA8SH3BPF8 625 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 J3KR12 359 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 TRAFD1O14545 582 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 SNX2O60749 519 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 HEXIM1O94992 359 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 SOD1P00441 154 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 BPIP17213 487 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 TNFAIP3P21580 790 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 HDAC4P56524 1084 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 POLR2LP62875 67 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 BCL2L1Q07817 233 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms