RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CCDC34Q96HJ3 373 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 ZNF479Q96JC4 524 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 PLK3Q9H4B4 646 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 OCIAD1Q9NX40 245 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 TERF2IPQ9NYB0 399 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 UBA2Q9UBT2 640 aaPredicted RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 OR14J1Q9UGF5 321 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 FBXW11Q9UKB1 542 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 ACSL5Q9ULC5 683 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 CLIC4Q9Y696 253 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 CKAP5Q14008 2032 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 GOLGA6L9A6NEM1 432 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 H3BQ06 376 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 M0QZ24 198 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 SPINT2O43291 252 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 SMAD6O43541 496 aaKnown RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 GPC4O75487 556 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 HIST1H2ABP04908 130 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 NGFRP08138 427 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 FCGR1AP12314 374 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 PORP16435 677 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 ZNF12P17014 697 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 HIST1H2ADP20671 130 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 ACADLP28330 430 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 FASLGP48023 281 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 THBS3P49746 956 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 PEX5P50542 639 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 SNX16P57768 344 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 LTBQ06643 244 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 EPS8Q12929 822 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 CALCRLQ16602 461 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 ZNF805Q5CZA5 627 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 RAB41Q5JT25 222 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 DCST1Q5T197 706 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 KRBA2Q6ZNG9 492 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 HIST3H2AQ7L7L0 130 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 BEST3Q8N1M1 668 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 C17orf53Q8N3J3 647 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 MAGEC3Q8TD91 643 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 APBB2Q92870 758 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 MOAP1Q96BY2 351 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 ORAI1Q96D31 301 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 CALML4Q96GE6 196 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 GRAMD2BQ96HH9 432 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 OR1F2PQ96R84 312 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 CSF3RQ99062 836 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 NUDT16L1Q9BRJ7 211 aaKnown RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 ZPBPQ9BS86 351 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 C1QTNF1Q9BXJ1 281 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 SPRY4Q9C004 299 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 PIGMQ9H3S5 423 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 MAGIXQ9H6Y5 334 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 SEBOXQ9HB31 216 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 SUCLA2Q9P2R7 463 aaPredicted RBP3.92□□□□□ -1.78
CD46-216ENST00000490278 COPG2Q9UBF2 871 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 NENFQ9UMX5 172 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 TMEM5Q9Y2B1 443 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 NFS1Q9Y697 457 aa3.92□□□□□ -1.78
CD46-216ENST00000490278 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 A0A1W2PQ09 198 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 KANSL1LA0AUZ9 987 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 LACTBL1A8MY62 500 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 OGG1O15527 345 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 AHCYL1O43865 530 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 RFPL2O75678 378 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 GJB3O75712 270 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 TPPPO94811 219 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 ICAM1P05362 532 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 ANXA7P20073 488 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 PON1P27169 355 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 GCH1P30793 250 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 ACTN2P35609 894 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 CLCNKAP51800 687 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SEC61A1P61619 476 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 TUBA1BP68363 451 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 MYBPHQ13203 477 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 MAD2L1Q13257 205 aaPredicted RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 NFATC4Q14934 902 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 OASLQ15646 514 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 SETMARQ53H47 684 aaPredicted RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 RGMBQ6NW40 437 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 FAM122CQ6P4D5 195 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 CLEC17AQ6ZS10 378 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SDCCAG8Q86SQ7 713 aaPredicted RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 ZDHHC17Q8IUH5 632 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SPATA2LQ8IUW3 424 aaPredicted RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 CHERPQ8IWX8 916 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 SAMD14Q8IZD0 417 aaPredicted RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 TAGAPQ8N103 731 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 TMTC2Q8N394 836 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 PCDH20Q8N6Y1 951 aaKnown RBP3.91□□□□□ -1.78
CD46-216ENST00000490278 ZNF114Q8NC26 417 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 OR1J2Q8NGS2 313 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 TRPC4APQ8TEL6 797 aa3.91□□□□□ -1.78
CD46-216ENST00000490278 SAT2Q96F10 170 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms