RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 UBE3AQ05086 875 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 PMS2P3Q13401 168 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 PRKD1Q15139 912 aaPredicted RBP9.81□□□□□ -0.84
NOD1-208ENST00000489614 NPTX1Q15818 432 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 CDO1Q16878 200 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 AGAP7PQ5VUJ5 663 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 CTRB2Q6GPI1 263 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 ATG14Q6ZNE5 492 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 RTL10Q7L3V2 364 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 CHST15Q7LFX5 561 aaPredicted RBP9.81□□□□□ -0.84
NOD1-208ENST00000489614 DCP2Q8IU60 420 aaKnown RBP9.81□□□□□ -0.84
NOD1-208ENST00000489614 BEND7Q8N7W2 519 aaPredicted RBP9.81□□□□□ -0.84
NOD1-208ENST00000489614 FAM47BQ8NA70 645 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 UQCC2Q9BRT2 126 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 CCDC106Q9BWC9 280 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 VPS11Q9H270 941 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 C8orf4Q9NR00 106 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 OLAHQ9NV23 265 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 STOML2Q9UJZ1 356 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 PADI4Q9UM07 663 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 RAD54BQ9Y620 910 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 DGKBQ9Y6T7 804 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 BPTFQ12830 3046 aa9.81□□□□□ -0.84
NOD1-208ENST00000489614 SNX2O60749 519 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SCO1O75880 301 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SOAT2O75908 522 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 BCL10O95999 233 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 MAGP20916 626 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 OR1D2P34982 312 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 OPRL1P41146 370 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 GRIA3P42263 894 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 COPAP53621 1224 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 RPL10AP62906 217 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 MRPS15P82914 257 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 TMPRSS15P98073 1019 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 RING1Q06587 406 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 DLG2Q15700 870 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 GSTA5Q7RTV2 222 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 CADM2Q8N3J6 435 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 CATSPER1Q8NEC5 780 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 ACDQ96AP0 544 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 PGLYRP2Q96PD5 576 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 NGRNQ9NPE2 291 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 DDX28Q9NUL7 540 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 DNAJC28Q9NX36 388 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 ATPIF1Q9UII2 106 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 CST8O60676 142 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 JRKO75564 520 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 NCAM1P13591 858 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 EEF1DP29692 281 aaKnown RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 HK2P52789 917 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 RAD23AP54725 363 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 CDH6P55285 790 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 IFITM3Q01628 133 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 TNK2Q07912 1038 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 DUSP4Q13115 394 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SDHAF4Q5VUM1 108 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 RSBN1Q5VWQ0 802 aaPredicted RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 SDE2Q6IQ49 451 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 CCDC28AQ8IWP9 274 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 FIBCD1Q8N539 461 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 TAB3Q8N5C8 712 aaPredicted RBP9.8□□□□□ -0.84
NOD1-208ENST00000489614 KCTD6Q8NC69 237 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 BBOF1Q8ND07 529 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SLC22A17Q8WUG5 538 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 QKIQ96PU8 341 aaKnown RBP eCLIP9.8□□□□□ -0.84
NOD1-208ENST00000489614 PSD2Q9BQI7 771 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 AIFM2Q9BRQ8 373 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 SENP1Q9P0U3 644 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 MFHAS1Q9Y4C4 1052 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 YIPF1Q9Y548 306 aa9.8□□□□□ -0.84
NOD1-208ENST00000489614 NRG2O14511 850 aaPredicted RBP9.79□□□□□ -0.84
NOD1-208ENST00000489614 ASNA1O43681 348 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 SEMA3DO95025 777 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 NAGAP17050 411 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 GOT1P17174 413 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 YWHAQP27348 245 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 GJC1P36383 396 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 NR2C2P49116 596 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 EPHA5P54756 1037 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 GDF10P55107 478 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 ARPP19P56211 112 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 DSTNP60981 165 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 KCNC3Q14003 757 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 ADGRE1Q14246 886 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 TRIP4Q15650 581 aaPredicted RBP9.79□□□□□ -0.84
NOD1-208ENST00000489614 ZCCHC8Q6NZY4 707 aaKnown RBP9.79□□□□□ -0.84
NOD1-208ENST00000489614 FAM131BQ86XD5 332 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 FAM217AQ8IXS0 508 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 LSMEM2Q8N112 164 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 SLC7A14Q8TBB6 771 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 ACTL9Q8TC94 416 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 RNF139Q8WU17 664 aa9.79□□□□□ -0.84
NOD1-208ENST00000489614 FATE1Q969F0 183 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms