RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 GPR156Q8NFN8 814 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 CCDC74AQ96AQ1 378 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 NXPE2Q96DL1 559 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 SCARF2Q96GP6 870 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 COX14Q96I36 57 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 DEPDC7Q96QD5 511 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 DPEP2Q9H4A9 486 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 ZFYVE1Q9HBF4 777 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 MAGEE1Q9HCI5 957 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 TRNAU1APQ9NX07 287 aaKnown RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 CNOT6Q9ULM6 557 aaKnown RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 PACSIN2Q9UNF0 486 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 EFR3BQ9Y2G0 817 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 RAXQ9Y2V3 346 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 AK5Q9Y6K8 562 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 CELSR3Q9NYQ7 3312 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 FADS2P1A8MWK0 482 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 H7C0C1 242 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 NDST3O95803 873 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 AK4P27144 223 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 RBL1P28749 1068 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 PTPN7P35236 360 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ADCY8P40145 1251 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ATP5OP48047 213 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 CTBSQ01459 385 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 OTUD4Q01804 1114 aaKnown RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 XRCC4Q13426 336 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 CCDC181Q5TID7 509 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 KDELC1Q6UW63 502 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 MARK2Q7KZI7 788 aaKnown RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 TMC3Q7Z5M5 1100 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 GPR26Q8NDV2 337 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ACTL9Q8TC94 416 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 OXNAD1Q96HP4 312 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 VAT1Q99536 393 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 FAM118BQ9BPY3 351 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 FAM153AQ9UHL3 310 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 ZNF711Q9Y462 761 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 PLEKHM1Q9Y4G2 1056 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 SPO11Q9Y5K1 396 aa12.82□□□□□ -0.36
HDAC1-209ENST00000484305 OAS3Q9Y6K5 1087 aaKnown RBP12.82□□□□□ -0.36
HDAC1-209ENST00000484305 LOC285095A0A1B0GVY8 99 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 RGSL1A5PLK6 1076 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 AURKAO14965 403 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 USP12O75317 370 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 ASMTLO95671 621 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 FTCDO95954 541 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 SLC4A1P02730 911 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 FGF1P05230 155 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 CHRNA4P43681 627 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 WNT3AP56704 352 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 CCL7P80098 99 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 ILF3Q12906 894 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC1-209ENST00000484305 HLTFQ14527 1009 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC1-209ENST00000484305 C14orf28Q4W4Y0 310 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 PYCR3Q53H96 274 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 SLC30A9Q6PML9 568 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
HDAC1-209ENST00000484305 SLC25A41Q8N5S1 370 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 MRGPRX2Q96LB1 330 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 FCRL5Q96RD9 977 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 GPR63Q9BZJ6 419 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 TAAR2Q9P1P5 351 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 PCYT1BQ9Y5K3 369 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-209ENST00000484305 ADAMTS20P59510 1910 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 LAMA5O15230 3695 aa12.81□□□□□ -0.36
HDAC1-209ENST00000484305 DSPP15924 2871 aaKnown RBP12.8□□□□□ -0.36
HDAC1-209ENST00000484305 CFAP47Q6ZTR5 3102 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 NTN3O00634 580 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-209ENST00000484305 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
HDAC1-209ENST00000484305 BRINP1O60477 761 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 DNAJC6O75061 913 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 TCEA3O75764 348 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 MPOP05164 745 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 GLB1P16278 677 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 BPIP17213 487 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 PDX1P52945 283 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
HDAC1-209ENST00000484305 SPIDRQ14159 915 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 SIRPB2Q5JXA9 342 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 CERCAMQ5T4B2 595 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 ALS2CLQ60I27 953 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 SYCE1Q8N0S2 351 aa12.8□□□□□ -0.36
HDAC1-209ENST00000484305 TXLNBQ8N3L3 684 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms