RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SOD1P00441 154 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 CEACAM5P06731 702 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 CKMT1AP12532 417 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 SPINK2P20155 84 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 ACP1P24666 158 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 MSNP26038 577 aaKnown RBP18.28■□□□□ 0.52
SMIM4-204ENST00000482728 ACTN2P35609 894 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 POLD2P49005 469 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 ACADVLP49748 655 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 SNX1Q13596 522 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 GSE1Q14687 1217 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 P3H1Q32P28 736 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 HENMT1Q5T8I9 393 aaKnown RBP18.28■□□□□ 0.52
SMIM4-204ENST00000482728 ALS2CLQ60I27 953 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 RANBP10Q6VN20 620 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 FRMD8Q9BZ67 464 aaPredicted RBP18.28■□□□□ 0.52
SMIM4-204ENST00000482728 KCNF1Q9H3M0 494 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 TRMT1Q9NXH9 659 aaKnown RBP18.28■□□□□ 0.52
SMIM4-204ENST00000482728 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
SMIM4-204ENST00000482728 CPED1A4D0V7 1026 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 AURKAO14965 403 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 DKK1O94907 266 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 IFNB1P01574 187 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 FGGP02679 453 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 CELA2BP08218 269 aaPredicted RBP18.27■□□□□ 0.52
SMIM4-204ENST00000482728 MYF5P13349 255 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 CXCR5P32302 372 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 HMGCLP35914 325 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 GNPDA1P46926 289 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 E2F1Q01094 437 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 ZNF569Q5MCW4 686 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 KCTD16Q68DU8 428 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 DHRS13Q6UX07 377 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 TRIM74Q86UV6 250 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 GPR26Q8NDV2 337 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 FAM46DQ8NEK8 389 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 WDR24Q96S15 920 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 APOL2Q9BQE5 337 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 GORASP1Q9BQQ3 440 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 ZSCAN5AQ9BUG6 496 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 TMEM168Q9H0V1 697 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 BPIFA1Q9NP55 256 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 GULP1Q9UBP9 304 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 GPR34Q9UPC5 381 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.52
SMIM4-204ENST00000482728 PSMD3O43242 534 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 KIF5CO60282 957 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 BPIP17213 487 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 ADRA1AP35348 466 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 GDF10P55107 478 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 DCDC1P59894 354 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 ILF3Q12906 894 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMIM4-204ENST00000482728 NR0B2Q15466 257 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 CCNG2Q16589 344 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 LONRF2Q1L5Z9 754 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 C6orf132Q5T0Z8 1188 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 ZDHHC20Q5W0Z9 365 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 MARK2Q7KZI7 788 aaKnown RBP18.26■□□□□ 0.51
SMIM4-204ENST00000482728 GLT6D1Q7Z4J2 308 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 GALNT15Q8N3T1 639 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 COX14Q96I36 57 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 TBL1YQ9BQ87 522 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 BOCQ9BWV1 1114 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 TRNAU1APQ9NX07 287 aaKnown RBP18.26■□□□□ 0.51
SMIM4-204ENST00000482728 SUFUQ9UMX1 484 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 WASF3Q9UPY6 502 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 ZKSCAN5Q9Y2L8 839 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 PKP3Q9Y446 797 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 GPSM3Q9Y4H4 160 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 NEUROG3Q9Y4Z2 214 aa18.26■□□□□ 0.51
SMIM4-204ENST00000482728 ASXL3Q9C0F0 2248 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 C2orf81A6NN90 581 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 FADS2P1A8MWK0 482 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 STX7O15400 261 aaKnown RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 SLC25A14O95258 325 aaPredicted RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 METTL18O95568 372 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 FUCA1P04066 466 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 ATP1A1P05023 1023 aaKnown RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 IVLP07476 585 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 SPARCL1Q14515 664 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 OASLQ15646 514 aaKnown RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 PDPK2PQ6A1A2 396 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 TTC30BQ8N4P2 665 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 TAB3Q8N5C8 712 aaPredicted RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 TRAM1L1Q8N609 369 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 PLEKHG4BQ96PX9 1271 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 GSDMCQ9BYG8 508 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 ABCG4Q9H172 646 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 HOMER3Q9NSC5 361 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 SIRPGQ9P1W8 387 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 NFKBIL1Q9UBC1 381 aaPredicted RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 ZNHIT2Q9UHR6 403 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 FEZ2Q9UHY8 353 aaPredicted RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
SMIM4-204ENST00000482728 CNOT6Q9ULM6 557 aaKnown RBP18.25■□□□□ 0.51
SMIM4-204ENST00000482728 USP12O75317 370 aa18.24■□□□□ 0.51
SMIM4-204ENST00000482728 PPFIA2O75334 1257 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms