RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 VPS18Q9P253 973 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 TRIM10Q9UDY6 481 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 AMFRQ9UKV5 643 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 AK5Q9Y6K8 562 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 LOC285095A0A1B0GVY8 99 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 INPP4BO15327 924 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 NOBOXO60393 691 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 EPOP01588 193 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 SLC4A1P02730 911 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 PTMAP06454 111 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 PIRTP0C851 137 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 PYGMP11217 842 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 GLB1P16278 677 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 ADCY8P40145 1251 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 WNT3AP56704 352 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 DCDC1P59894 354 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 EIF3EP60228 445 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 MPP3Q13368 585 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 LRP8Q14114 963 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 SPIDRQ14159 915 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 C14orf28Q4W4Y0 310 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 CERCAMQ5T4B2 595 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 ITPRIPL1Q6GPH6 555 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 KDELC1Q6UW63 502 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 TMC3Q7Z5M5 1100 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 EID2BQ96D98 161 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 WDR24Q96S15 920 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 HERPUD2Q9BSE4 406 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 NFKBIL1Q9UBC1 381 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 TMEM98Q9Y2Y6 226 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 PCDHB1Q9Y5F3 818 aa11.81□□□□□ -0.52
HMGN1-213ENST00000482192 MAP1BP46821 2468 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 TPRP12270 2363 aaKnown RBP11.81□□□□□ -0.52
HMGN1-213ENST00000482192 ARID1BQ8NFD5 2236 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 FADS2P1A8MWK0 482 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 NUDT21O43809 227 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 USP12O75317 370 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 ASMTLO95671 621 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 FTCDO95954 541 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 RBP3P10745 1247 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 PNLIPP16233 465 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 RBL1P28749 1068 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 CTBSQ01459 385 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 HLTFQ14527 1009 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 PYCR3Q53H96 274 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 SIRPB2Q5JXA9 342 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 ALS2CLQ60I27 953 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 SLC30A9Q6PML9 568 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 MARK2Q7KZI7 788 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 NRROSQ86YC3 692 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 GALNT13Q8IUC8 556 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 IPMKQ8NFU5 416 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 OXNAD1Q96HP4 312 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 ZSCAN5AQ9BUG6 496 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 FSD1LQ9BXM9 530 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 TSGA10Q9BZW7 698 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 GBA3Q9H227 469 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 TRABDQ9H4I3 376 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 SYNDIG1Q9H7V2 258 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 RMI1Q9H9A7 625 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 SPATS2LQ9NUQ6 558 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 TAAR2Q9P1P5 351 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 APPL1Q9UKG1 709 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 CNOT6Q9ULM6 557 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 GPSM3Q9Y4H4 160 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 SPO11Q9Y5K1 396 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 CAPN6Q9Y6Q1 641 aa11.8□□□□□ -0.52
HMGN1-213ENST00000482192 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
HMGN1-213ENST00000482192 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 A0A0U1RQJ8 604 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 GOLGA6L9A6NEM1 432 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 F5H423 210 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 NTN3O00634 580 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 KCNN4O15554 427 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 BRINP1O60477 761 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ANXA9O76027 345 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ATP1A1P05023 1023 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 FGF1P05230 155 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 RPLP0P05388 317 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 HLA-DPA1P20036 260 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 AK4P27144 223 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 HMGCLP35914 325 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ACTR1BP42025 376 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 CHRNA4P43681 627 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ACTR1AP61163 376 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms