RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 VPS35Q96QK1 796 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 LRRC61Q9BV99 259 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 RIOK2Q9BVS4 552 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 FGF22Q9HCT0 170 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 UCKL1Q9NWZ5 548 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 TOR4AQ9NXH8 423 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 TRMT1Q9NXH9 659 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 PAK5Q9P286 719 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 CNOT6Q9ULM6 557 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 SNX12Q9UMY4 172 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 SPO11Q9Y5K1 396 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 ZNF106Q9H2Y7 1883 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 ASXL3Q9C0F0 2248 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 PRSS38A1L453 326 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 FAM221BA6H8Z2 402 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 TRIM38O00635 465 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 ENC1O14682 589 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 SUN1O94901 812 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 AGTP01019 485 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 CKMT1AP12532 417 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 BPIP17213 487 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 TCP1P17987 556 aaKnown RBP15.38■□□□□ 0.05
C9orf3-217ENST00000479161 PSMA3P25788 255 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 PMLP29590 882 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 CXCR5P32302 372 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 CHRNA4P43681 627 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 DUSP3P51452 185 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-217ENST00000479161 PRRT3Q5FWE3 981 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 KDM7AQ6ZMT4 941 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 GKN2Q86XP6 184 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 CACTIN-AS1Q8N1I8 211 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 PRELID2Q8N945 189 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 GPR26Q8NDV2 337 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 OR1E3Q8WZA6 343 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 CNDP2Q96KP4 475 aaKnown RBP15.38■□□□□ 0.05
C9orf3-217ENST00000479161 OSBPL9Q96SU4 736 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 TBL1YQ9BQ87 522 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 FICDQ9BVA6 458 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 BOCQ9BWV1 1114 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 WASF3Q9UPY6 502 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
C9orf3-217ENST00000479161 A0A0U1RQS6 177 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 C2orf81A6NN90 581 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 SDC3O75056 442 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 CRTAMO95727 393 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 ATP1A1P05023 1023 aaKnown RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 GP1BAP07359 652 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 FTH1P19P0C7X4 201 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 PIRTP0C851 137 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 CTSEP14091 401 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 LPOP22079 712 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 SEMA5AQ13591 1074 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 ZNF542PQ5EBM4 170 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 FAM182AQ5T1J6 154 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 ARMC3Q5W041 872 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 PAPD7Q5XG87 772 aaKnown RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 GLT6D1Q7Z4J2 308 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 RAB44Q7Z6P3 723 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 HID1Q8IV36 788 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 SLC25A41Q8N5S1 370 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 CCDC89Q8N998 374 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 GPBAR1Q8TDU6 330 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 LMX1AQ8TE12 382 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 GLMNQ92990 594 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 TSACCQ96A04 125 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 CLPBQ9H078 707 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 EIF2B3Q9NR50 452 aaKnown RBP15.37■□□□□ 0.05
C9orf3-217ENST00000479161 CD84Q9UIB8 345 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 PKP3Q9Y446 797 aa15.37■□□□□ 0.05
C9orf3-217ENST00000479161 SPAARA0A1B0GVQ0 90 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 FADS2P1A8MWK0 482 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 AP3B1O00203 1094 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 PGRMC1O00264 195 aaKnown RBP15.36■□□□□ 0.05
C9orf3-217ENST00000479161 AURKAO14965 403 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 YY2O15391 372 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 ANXA6P08133 673 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 RPIAP49247 311 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 ACADVLP49748 655 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 CDK16Q00536 496 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 LAMB3Q13751 1172 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 LRP8Q14114 963 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 C6orf132Q5T0Z8 1188 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 OGFOD3Q6PK18 319 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 RBFAQ8N0V3 343 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 OR6C4Q8NGE1 309 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 BLOC1S5Q8TDH9 187 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 GLYATL1Q969I3 302 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 PDXPQ96GD0 296 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 AGAP2Q99490 1192 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 TCEAL2Q9H3H9 227 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-217ENST00000479161 TRIM39Q9HCM9 518 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 IL26Q9NPH9 171 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 SMOXQ9NWM0 555 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 APPL1Q9UKG1 709 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 RIMKLBQ9ULI2 386 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 PYCARDQ9ULZ3 195 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 TPRP12270 2363 aaKnown RBP15.36■□□□□ 0.05
C9orf3-217ENST00000479161 PTPRBP23467 1997 aa15.36■□□□□ 0.05
C9orf3-217ENST00000479161 RP1P56715 2156 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms