RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TRIM6Q9C030 488 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-215ENST00000476664 PDZD7Q9H5P4 517 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 CDCP1Q9H5V8 836 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 MAGEE1Q9HCI5 957 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 KCTD5Q9NXV2 234 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 ABI3Q9P2A4 366 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 CGNQ9P2M7 1197 aaKnown RBP6.94□□□□□ -1.3
LRCH3-215ENST00000476664 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 USP16Q9Y5T5 823 aa6.94□□□□□ -1.3
LRCH3-215ENST00000476664 GCN1Q92616 2671 aaKnown RBP6.94□□□□□ -1.3
LRCH3-215ENST00000476664 EDDM13A0A1B0GTR0 161 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 TCAF2A6NFQ2 919 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZAR1LA6NP61 321 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 MCF2LO15068 1137 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SLCO2B1O94956 709 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZFYP08048 801 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PDHA1P08559 390 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ACTN1P12814 892 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PKMP14618 531 aaKnown RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PDGFRAP16234 1089 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 FERP16591 822 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF28P17035 718 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CCNA2P20248 432 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 AGAP20933 346 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 GLDCP23378 1020 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 GSTM2P28161 218 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CDAP32320 146 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SOAT1P35610 550 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CHN2P52757 468 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 MRPL28Q13084 256 aaKnown RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 NFYCQ13952 458 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 TWISTNBQ3B726 338 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF568Q3ZCX4 644 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 NFXL1Q6ZNB6 911 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF551Q7Z340 670 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 TMPRSS9Q7Z410 1059 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CLNKQ7Z7G1 428 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 VPS52Q8N1B4 723 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 GRAPLQ8TC17 118 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ATG4AQ8WYN0 398 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 TEKT1Q969V4 418 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 RSPRY1Q96DX4 576 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 OSBPL9Q96SU4 736 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SH3GL2Q99962 352 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CPPED1Q9BRF8 314 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CRACR2AQ9BSW2 395 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 HDHD5Q9BXW7 423 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 DNAJC18Q9H819 358 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SLC6A13Q9NSD5 602 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SETD4Q9NVD3 440 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 VSX1Q9NZR4 365 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 HDAC6Q9UBN7 1215 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 HPCAL4Q9UM19 191 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
LRCH3-215ENST00000476664 ZDHHC9Q9Y397 364 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 CMAHPQ9Y471 501 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PCDHGA5Q9Y5G8 931 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 PCDHGA1Q9Y5H4 931 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 COL4A1P02462 1669 aa6.93□□□□□ -1.3
LRCH3-215ENST00000476664 SIPA1L3O60292 1781 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PLXNA3P51805 1871 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 STRNO43815 780 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 STC2O76061 302 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 OPN1MWP04001 364 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF888P0CJ79 500 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 CETPP11597 493 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ADRA1DP25100 572 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 VIPR1P32241 457 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 IL15P40933 162 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 KIAA1024LP59773 190 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 MC2RQ01718 297 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PPATQ06203 517 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 DNASE1L3Q13609 305 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 HLXQ14774 488 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 RPS6KA1Q15418 735 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 OASLQ15646 514 aaKnown RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 NAB2Q15742 525 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 HIST2H2ACQ16777 129 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PROSER3Q2NL68 480 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 EDRF1Q3B7T1 1238 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 C12orf60Q5U649 245 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PMS2CLQ68D20 193 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 TXNDC8Q6A555 127 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 MOXD1Q6UVY6 613 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 IL20RBQ6UXL0 311 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 CFAP77Q6ZQR2 320 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 MFN1Q8IWA4 741 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF808Q8N4W9 903 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 NHLRC2Q8NBF2 726 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 DNAAF1Q8NEP3 725 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF483Q8TF39 744 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms