RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 GAS2L3Q86XJ1 694 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 PHYKPLQ8IUZ5 450 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 AVL9Q8NBF6 648 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 KYQ8NBH2 561 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 ACRBPQ8NEB7 543 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 GPR156Q8NFN8 814 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 GPBAR1Q8TDU6 330 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 ZDHHC1Q8WTX9 485 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 SCAMP4Q969E2 229 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 TMEM74Q96NL1 305 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 FCRL5Q96RD9 977 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 GFM1Q96RP9 751 aaKnown RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 RIOK2Q9BVS4 552 aaKnown RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 LGR4Q9BXB1 951 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 SPATA16Q9BXB7 569 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 HEMGNQ9BXL5 484 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 SUDS3Q9H7L9 328 aaPredicted RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 AKAP7Q9P0M2 348 aaPredicted RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 NFKBIL1Q9UBC1 381 aaPredicted RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 RSPH14Q9UHP6 348 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 PNMA8BQ9ULN7 279 aaPredicted RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 AAR2Q9Y312 384 aaKnown RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 ZNF711Q9Y462 761 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 GPSM3Q9Y4H4 160 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 U3KQA8 63 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 AKAP13Q12802 2813 aa10.16□□□□□ -0.78
CCM2-208ENST00000476594 ANKRD11Q6UB99 2663 aaPredicted RBP10.16□□□□□ -0.78
CCM2-208ENST00000476594 PLXNB3Q9ULL4 1909 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 ASPMQ8IZT6 3477 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 RHPN2P1A8MT19 583 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 INPP4BO15327 924 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 USP12O75317 370 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 PPFIA2O75334 1257 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 PMPCBO75439 489 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 MT-CYBP00156 380 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 SLC4A1P02730 911 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 FGF1P05230 155 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 CELA2BP08218 269 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 MYF5P13349 255 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 NFKB1P19838 968 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 RBMS1P29558 406 aaKnown RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 ACTR1BP42025 376 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 ACTR1AP61163 376 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 GTF2H3Q13889 308 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 LLGL1Q15334 1064 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 TCEA2Q15560 299 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 CLPPQ16740 277 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 CERCAMQ5T4B2 595 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 HENMT1Q5T8I9 393 aaKnown RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 SEL1L2Q5TEA6 688 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 OGFOD3Q6PK18 319 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 LYSMD3Q7Z3D4 306 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 ARL14Q8N4G2 192 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 RNF10Q8N5U6 811 aaKnown RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 TRAM1L1Q8N609 369 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 KRT35Q92764 455 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 CCDC97Q96F63 343 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 ZNF578Q96N58 590 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 PLEKHG4BQ96PX9 1271 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 TRIB3Q96RU7 358 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 ZCCHC2Q9C0B9 1178 aaKnown RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 CARD9Q9H257 536 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 POLR1BQ9H9Y6 1135 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 THSD1Q9NS62 852 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 TAAR2Q9P1P5 351 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 SAE1Q9UBE0 346 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 APPL1Q9UKG1 709 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 TFR2Q9UP52 801 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 SPEGQ15772 3267 aa10.15□□□□□ -0.78
CCM2-208ENST00000476594 KMT2BQ9UMN6 2715 aaPredicted RBP10.15□□□□□ -0.78
CCM2-208ENST00000476594 LRP4O75096 1905 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 CCDC187A0A096LP49 1063 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 ARHGAP6O43182 974 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 SLC25A14O95258 325 aaPredicted RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 RPLP0P05388 317 aaKnown RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 RBP3P10745 1247 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 VCLP18206 1134 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 HMGCLP35914 325 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 ADCY8P40145 1251 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 ABCG1P45844 678 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 LSSP48449 732 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 MARCKSL1P49006 195 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 PPM1FP49593 454 aaPredicted RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 WNT3AP56704 352 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 CLDN6P56747 220 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 EIF3EP60228 445 aaKnown RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 ERVPABLB-1P60509 514 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 GABREP78334 506 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 PDE1BQ01064 536 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 CTBSQ01459 385 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 OTUD4Q01804 1114 aaKnown RBP10.14□□□□□ -0.79
CCM2-208ENST00000476594 WASHC5Q12768 1159 aa10.14□□□□□ -0.79
CCM2-208ENST00000476594 HLTFQ14527 1009 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCM2-208ENST00000476594 MAP9Q49MG5 647 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms