RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	THPO	P40225	353 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	PNPLA4	P41247	253 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	CDH12	P55289	794 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	WDR43	Q15061	677 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	RUNDC3A	Q59EK9	446 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	TMEM268	Q5VZI3	342 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	NADSYN1	Q6IA69	706 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	AADACL2	Q6P093	401 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	CLEC18C	Q8NCF0	446 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	ACER1	Q8TDN7	264 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	GDPD5	Q8WTR4	605 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	SLC35F5	Q8WV83	523 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	RUBCN	Q92622	972 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	KTI12	Q96EK9	354 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	SPATC1L	Q9H0A9	340 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	MTIF3	Q9H2K0	278 aa	Known RBP	4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	SEL1L	Q9UBV2	794 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	NRBP1	Q9UHY1	535 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	PCDHGB3	Q9Y5G1	929 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	RAI2	Q9Y5P3	530 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	ELP1	O95163	1332 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912	MROH7	Q68CQ1	1323 aa		4.94	□□□□□ -1.62
PRKD3-208	ENST00000475912		A0A0U1RQG5	324 aa	Predicted RBP	4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	CCDC189	A1A4V9	331 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	TARSL2	A2RTX5	802 aa	Known RBP	4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	EYA2	O00167	538 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	ACOT8	O14734	319 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	ASGR1	P07306	291 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	PRSS2	P07478	247 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	MYZAP	P0CAP1	466 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	GNLY	P22749	145 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	PDLIM4	P50479	330 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	CUL4B	Q13620	913 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	SERPINA11	Q86U17	422 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	TEX11	Q8IYF3	940 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	SPATA5	Q8NB90	893 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	NSUN4	Q96CB9	384 aa	Known RBP	4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	EVI5L	Q96CN4	794 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	GLT1D1	Q96MS3	346 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	SCLT1	Q96NL6	688 aa		4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	TEFM	Q96QE5	360 aa	Known RBP	4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	PDS5A	Q29RF7	1337 aa	Known RBP	4.93	□□□□□ -1.62
PRKD3-208	ENST00000475912	COL4A6	Q14031	1691 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	BRWD1	Q9NSI6	2320 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	MED19	A0JLT2	244 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	C17orf102	A2RUQ5	167 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	EME2	A4GXA9	379 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912		H3BQ06	376 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	CTAGE5	O15320	804 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	CBX6	O95503	412 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	RFC1	P35251	1148 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	SKIV2L2	P42285	1042 aa	Known RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	DPP6	P42658	865 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	MVD	P53602	400 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	DSC1	Q08554	894 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	THOC5	Q13769	683 aa	Known RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	RALBP1	Q15311	655 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	SHB	Q15464	509 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	AP5B1	Q2VPB7	878 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	HSP90AB4P	Q58FF6	505 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	ZNF484	Q5JVG2	852 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	ATG9B	Q674R7	924 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	ASCL5	Q7RTU5	278 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	PALB2	Q86YC2	1186 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	ZDHHC23	Q8IYP9	409 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	CPXCR1	Q8N123	301 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	NEK9	Q8TD19	979 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	LMLN	Q96KR4	655 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	GFM1	Q96RP9	751 aa	Known RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	TM6SF1	Q9BZW5	370 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	LHPP	Q9H008	270 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	TRPV6	Q9H1D0	765 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	MROH8	Q9H579	483 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	TLR8	Q9NR97	1041 aa	Known RBP	4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	MUTYH	Q9UIF7	546 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	DHDH	Q9UQ10	334 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	DGKB	Q9Y6T7	804 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	GRIN2D	O15399	1336 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	FLT1	P17948	1338 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	FANCI	Q9NVI1	1328 aa		4.92	□□□□□ -1.62
PRKD3-208	ENST00000475912	CACNA1B	Q00975	2339 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	NCOR2	Q9Y618	2525 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	FRYL	O94915	3013 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912		A0A1W2PRG0	241 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	DUSP11	O75319	330 aa	Known RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	SNAI1	O95863	264 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	GLUD1	P00367	558 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	ENO3	P13929	434 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	GLUD2	P49448	558 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	PPM1F	P49593	454 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	BYSL	Q13895	437 aa	Known RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	COG2	Q14746	738 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	TDRD12	Q587J7	1177 aa	Known RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	TATDN1	Q6P1N9	297 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	DEFB128	Q7Z7B8	93 aa		4.91	□□□□□ -1.62
PRKD3-208	ENST00000475912	ADGRA1	Q86SQ6	560 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms