RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PAMP19021 973 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 DNAJB1P25685 340 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 CORO1AP31146 461 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 LEPRP48357 1165 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 PSMD8P48556 350 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 ADARP55265 1226 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 SULT2A1Q06520 285 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 TRIM25Q14258 630 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 CYTH1Q15438 398 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 UGP2Q16851 508 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 ERI1Q8IV48 349 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 TADA1Q96BN2 335 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 NSUN5Q96P11 429 aaKnown RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 MRGBPQ9NV56 204 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 FAM50BQ9Y247 325 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 VWA7Q9Y334 891 aa12.42□□□□□ -0.42
RNF220-211ENST00000474956 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.42□□□□□ -0.42
RNF220-211ENST00000474956 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 TRPC5OSA6NMA1 111 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 H6PDO95479 791 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 PRAMEF12O95522 483 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 C8BP07358 591 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 HMGA1P17096 107 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 HTR7P34969 479 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 GNA12Q03113 381 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 IL10RBQ08334 325 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 NRF1Q16656 503 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 CEP70Q8NHQ1 597 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 HMGCLL1Q8TB92 370 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 WFDC5Q8TCV5 224 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 POLR1EQ9GZS1 481 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNF220-211ENST00000474956 MRM3Q9HC36 420 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 FBRSL1Q9HCM7 1045 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 TLR9Q9NR96 1032 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 MYOFQ9NZM1 2061 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 C7orf72A4D263 438 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 ACSL4O60488 711 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 ATP5C1P36542 298 aaKnown RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 PSME3P61289 254 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 IKBKEQ14164 716 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 GK5Q6ZS86 529 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 COQ10BQ9H8M1 238 aa12.41□□□□□ -0.42
RNF220-211ENST00000474956 POLR3BQ9NW08 1133 aaPredicted RBP12.41□□□□□ -0.42
RNF220-211ENST00000474956 hCG_2014768A0A024R1R8 64 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 OR1I1O60431 355 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 STC2O76061 302 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 CDK9P50750 372 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 EMP3P54852 163 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 NME5P56597 212 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 POU4F1Q01851 419 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 RHDQ02161 417 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 SEMG2Q02383 582 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 STX5Q13190 355 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 OR9I1Q8NGQ6 314 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 ESAMQ96AP7 390 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 MAELQ96JY0 434 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 KCNA7Q96RP8 456 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 GMPR2Q9P2T1 348 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 UBA6A0AVT1 1052 aaPredicted RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 K7ERQ8 282 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 SDHDO14521 159 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 HOXD10P28358 340 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 ALDH3B2P48448 385 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 OR4D1Q15615 310 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 ISCA2Q86U28 154 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 EFHBQ8N7U6 833 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 TRPC4APQ8TEL6 797 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 SEPT8Q92599 483 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 RMDN1Q96DB5 314 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 MRPL57Q9BQC6 102 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 MYRFQ9Y2G1 1151 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 PCDHGA7Q9Y5G6 932 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 UBXN8O00124 270 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 AP3B1O00203 1094 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 CD3EAPO15446 510 aaKnown RBP12.4□□□□□ -0.42
RNF220-211ENST00000474956 NPHS1O60500 1241 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 PRLP01236 227 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 GKP32189 559 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 FOXA1P55317 472 aa12.4□□□□□ -0.42
RNF220-211ENST00000474956 MAPRE2Q15555 327 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms