RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NLGN3Q9NZ94 848 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 KLF15Q9UIH9 416 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 SPO11Q9Y5K1 396 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 CACNA1AO00555 2505 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 CFAP54Q96N23 3096 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 TPP1O14773 563 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 AURKAO14965 403 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 USP12O75317 370 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 SLC25A14O95258 325 aaPredicted RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 BPIP17213 487 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 LPOP22079 712 aaPredicted RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 SPAM1P38567 509 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 KCNJ1P48048 391 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 RPIAP49247 311 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 DUSP3P51452 185 aaPredicted RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 PEX6Q13608 980 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 CCDC157Q569K6 752 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 PDPK2PQ6A1A2 396 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 KANSL1Q7Z3B3 1105 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 GLRX5Q86SX6 157 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 GPR26Q8NDV2 337 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 GDAP1Q8TB36 358 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 GRK7Q8WTQ7 553 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 OR1E3Q8WZA6 343 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 PDXPQ96GD0 296 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 AGAP2Q99490 1192 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 LRRC61Q9BV99 259 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 SUDS3Q9H7L9 328 aaPredicted RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 CARS2Q9HA77 564 aaKnown RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 ARNT2Q9HBZ2 717 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 NFKBIL1Q9UBC1 381 aaPredicted RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 SAR1BQ9Y6B6 198 aa13.67□□□□□ -0.22
USF1-205ENST00000473969 ASCC3Q8N3C0 2202 aaKnown RBP13.67□□□□□ -0.22
USF1-205ENST00000473969 SPTBN4Q9H254 2564 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 SIGLEC6O43699 453 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 TRIM16O95361 564 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 APRTP07741 180 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 ETS1P14921 441 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 RPL22P35268 128 aaKnown RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 GNPDA1P46926 289 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 FOXK2Q01167 660 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 CDH17Q12864 832 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 ILF3Q12906 894 aaKnown RBP eCLIP13.66□□□□□ -0.22
USF1-205ENST00000473969 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 ITGA9Q13797 1035 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 SEPT6Q14141 434 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 DEFB133Q30KQ1 61 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 KCTD11Q693B1 232 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 MARK2Q7KZI7 788 aaKnown RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 TAF8Q7Z7C8 310 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 KLHDC8BQ8IXV7 354 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 EID2BQ96D98 161 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 WDR24Q96S15 920 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 TCEAL2Q9H3H9 227 aaPredicted RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 FGF22Q9HCT0 170 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
USF1-205ENST00000473969 IL17CQ9P0M4 197 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 SUFUQ9UMX1 484 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 GPSM3Q9Y4H4 160 aa13.66□□□□□ -0.22
USF1-205ENST00000473969 TMEM131Q92545 1883 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 LRRK1Q38SD2 2015 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 GLYATL1P3A0A0U1RQE8 302 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 LMO7DNF2Z398 122 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 AP3B1O00203 1094 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 TRIM38O00635 465 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 ZNF185O15231 689 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 SOD1P00441 154 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 CEACAM5P06731 702 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 IVLP07476 585 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 FTH1P19P0C7X4 201 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 CDK4P11802 303 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 CKMT2P17540 419 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 TPH1P17752 444 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 CASQ1P31415 396 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 COILP38432 576 aaPredicted RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 HADHAP40939 763 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 OLIG2Q13516 323 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 SEMA5AQ13591 1074 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 TCEA2Q15560 299 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 PAPD7Q5XG87 772 aaKnown RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 ZCCHC8Q6NZY4 707 aaKnown RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 LVRNQ6Q4G3 990 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms